Factsheet for VIT_09s0002g07580.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 4
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0070g00550.t01	Wine grape	cytosol	45.19	89.81
VIT_09s0002g07690.t01	Wine grape	cytosol	46.47	80.11
VIT_09s0002g07840.t01	Wine grape	cytosol	68.91	74.39
VIT_09s0002g07620.t01	Wine grape	cytosol	60.58	64.07
VIT_00s0301g00170.t01	Wine grape	cytosol	59.94	58.62
VIT_00s0301g00180.t01	Wine grape	cytosol	59.94	57.54
VIT_09s0002g07760.t01	Wine grape	cytosol	47.12	56.76
VIT_09s0002g07820.t01	Wine grape	cytosol	20.51	55.65
VIT_14s0036g00560.t01	Wine grape	cytosol	27.88	54.72
GSMUA_Achr4P15790_001	Banana	cytosol	50.32	48.31
PGSC0003DMT400057744	Potato	cytosol	50.32	48.31
CDX79076	Canola	cytosol, peroxisome, plastid	31.09	48.26
Solyc02g078940.2.1	Tomato	extracellular	50.0	48.0
KRH10765	Soybean	cytosol, peroxisome, plastid	49.04	47.08
Bra013540.1-P	Field mustard	cytosol	47.44	45.54
CDX82839	Canola	cytosol	47.12	45.23
AT4G21580.1	Thale cress	cytosol	46.47	44.62
VIT_09s0002g08470.t01	Wine grape	cytosol	20.51	19.22
VIT_09s0002g08480.t01	Wine grape	cytosol	19.87	18.73
VIT_13s0067g00160.t01	Wine grape	peroxisome	18.27	16.52
VIT_07s0151g00260.t01	Wine grape	cytosol	16.99	15.68
VIT_07s0151g00200.t01	Wine grape	cytosol, mitochondrion, plastid	12.18	15.32
VIT_07s0151g00090.t01	Wine grape	mitochondrion	18.27	14.88
VIT_01s0127g00740.t01	Wine grape	plastid	17.95	14.85
VIT_19s0014g01890.t01	Wine grape	mitochondrion	16.99	14.68
VIT_15s0048g01710.t01	Wine grape	cytosol, peroxisome, plastid	15.06	14.29

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.2	InterPro:ADH_C	ProteinID:CCB59641	ProteinID:CCB59641.1
UniProt:F6HXH1	EMBL:FN596494	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	InterPro:PKS_ER
PANTHER:PTHR43006	PANTHER:PTHR43006:SF7	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000210A78C
ArrayExpress:VIT_09s0002g07580	EnsemblPlantsGene:VIT_09s0002g07580	EnsemblPlants:VIT_09s0002g07580.t01	SEG:seg	:	:

Description

No Description!

Coordinates

chr9:+:7738822..7741228

Molecular Weight (calculated)

33806.2 Da

IEP (calculated)

7.113

GRAVY (calculated)

0.249

Length

312 amino acids

Sequence
(BLAST)

001: MKAVVIATSG DPQVLQVQEV GNPEIGDVEV LIRVDAAAIN RADTLQRKGL HPPSKAAVPT PVSNVLESSK LLERSSLDGR LAIRLYIVTD QLAISFVMFC
101: ESWQHWNPLH YHLLVIRRAN TDFNAILYAI LLPPEYKFIY MVCALLSGGG HAEKVAVPAG QVLPVPSGVS LKDAAGIPEV ACTVWSTVLM MSRLSAGETF
201: LVHGGSIGIG TIYSNSEILR SKDVCINYKT ENFVAWVKEE TGGKGVDVIL DNIGGAYFWG DINGLNVDGR LFIIGFQGGT VVQVNLSGLL ARRLTVQELR
301: WILASQGKTK LP

Best Arabidopsis Sequence Match ( AT4G21580.3 )
(BLAST)

001: MKAIVISEPG KPEVLQLRDV ADPEVKDDEV LIRVLATALN RADTLQRLGL YNPPPGSSPY LGLECSGTIE SVGKGVSRWK VGDQVCALLS GGGYAEKVSV
101: PAGQIFPIPA GISLKDAAAF PEVACTVWST VFMMGRLSVG ESFLIHGGSS GIGTFAIQIA KHLGVRVFVT AAACKELGAD VCINYKTEDF VAKVKAETDG
201: KGVDVILDCI GAPYLQKNLD SLNFDGRLCI IGLMGGANAE IKLSSLLPKR LTVLGAALRP RSPENKAVVV REVEKNVWPA IEAGKVKPVI YKYLPLSQAA
301: EGHSLMESSN HIGKILLET

Arabidopsis Description

AT4g21580/F18E5_200 [Source:UniProtKB/TrEMBL;Acc:O65423]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.