Factsheet for GSMUA_Achr4P15790_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0301g00170.t01	Wine grape	cytosol	77.23	78.68
PGSC0003DMT400057744	Potato	cytosol	78.15	78.15
VIT_00s0301g00180.t01	Wine grape	cytosol	77.85	77.85
Solyc02g078940.2.1	Tomato	extracellular	77.85	77.85
KRH10765	Soybean	cytosol, peroxisome, plastid	77.85	77.85
TraesCS6D01G358100.1	Wheat	peroxisome	78.15	77.68
OQU85913	Sorghum	cytosol	77.54	76.83
TraesCS6B01G411600.1	Wheat	peroxisome	76.92	76.45
TraesCS6A01G373900.1	Wheat	golgi	76.62	76.15
Os02t0805600-01	Rice	plasma membrane	76.62	75.91
TraesCS6D01G358200.1	Wheat	cytosol	76.0	75.54
Bra013540.1-P	Field mustard	cytosol	74.77	74.77
CDX82839	Canola	cytosol	74.15	74.15
TraesCS6B01G411700.1	Wheat	cytosol	74.46	74.01
Zm00001d018418_P002	Maize	cytosol	76.62	73.24
Zm00001d051987_P001	Maize	cytosol	68.62	72.88
AT4G21580.1	Thale cress	cytosol	72.31	72.31
CDX79076	Canola	cytosol, peroxisome, plastid	43.38	70.15
HORVU6Hr1G088160.7	Barley	cytosol, mitochondrion, peroxisome	74.77	69.63
TraesCS6A01G374000.1	Wheat	cytosol	68.92	69.35
VIT_09s0002g07690.t01	Wine grape	cytosol	32.31	58.01
VIT_09s0002g07840.t01	Wine grape	cytosol	48.0	53.98
VIT_14s0036g00560.t01	Wine grape	cytosol	26.15	53.46
VIT_09s0002g07620.t01	Wine grape	cytosol	45.85	50.51
VIT_09s0002g07580.t01	Wine grape	peroxisome	48.31	50.32
VIT_09s0002g07760.t01	Wine grape	cytosol	34.77	43.63
VIT_09s0070g00550.t01	Wine grape	cytosol	20.62	42.68
GSMUA_Achr4P07780_001	Banana	cytosol	28.92	30.42
GSMUA_Achr2P06100_001	Banana	mitochondrion	21.54	28.57
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane, vacuole	24.92	28.22
GSMUA_Achr11P...	Banana	plasma membrane	28.62	28.18
GSMUA_Achr6P27730_001	Banana	cytosol	21.23	27.27
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	22.15	27.17
GSMUA_Achr2P06110_001	Banana	mitochondrion	26.77	26.13
GSMUA_AchrUn_...	Banana	plastid	25.85	24.14
GSMUA_Achr3P15520_001	Banana	mitochondrion	26.77	23.64
GSMUA_Achr8P27200_001	Banana	mitochondrion	26.77	23.58

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C	InterPro:ADH_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr4G15790_001	EnsemblPlants:GSMUA_Achr4P15790_001
EnsemblPlants:GSMUA_Achr4T15790_001	InterPro:GroES-like_sf	UniProt:M0SP93	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240
InterPro:PKS_ER	PANTHER:PTHR43006	PANTHER:PTHR43006:SF7	InterPro:Quinone_OxRdtase_PIG3	SMART:SM00829	SUPFAM:SSF50129
SUPFAM:SSF51735	TIGRFAMs:TIGR02824	UniParc:UPI0002966CBB	SEG:seg	:	:

Description

Putative Quinone oxidoreductase PIG3 [Source:GMGC_GENE;Acc:GSMUA_Achr4G15790_001]

Coordinates

chr4:+:12437281..12442170

Molecular Weight (calculated)

34190.6 Da

IEP (calculated)

6.997

GRAVY (calculated)

0.191

Length

325 amino acids

Sequence
(BLAST)

001: MRAVVITSPG GPEVLQVQEV EDPVVGDDEV LIKVEATALN RADTVQRKGL YPLPKGASPY PGLECSGTVL TVGKSVACWK VGDRVCALLS GGGYAEKVAV
101: PAGQVLPIPE GVTLRDAASF PEVACTVWST IFMTSQLSPG ETLLVHGGSS GIGTFAIQIA KHVGIRVFVT AGSEEKLAAC KNLGADVCIN YKTEDFVARV
201: EEETGGKGVD VILDNVGGPY LQKNLDSLGM DGRLFIIGFM GGAATEVNLS CLLARRLTIQ AAGLRNRSLE NKAKIVAEVK KHVWSAIAAG KVKPIVYKTF
301: PLSEAAEAHR LMEGSSHVGK ILLIP

Best Arabidopsis Sequence Match ( AT4G21580.1 )
(BLAST)

001: MKAIVISEPG KPEVLQLRDV ADPEVKDDEV LIRVLATALN RADTLQRLGL YNPPPGSSPY LGLECSGTIE SVGKGVSRWK VGDQVCALLS GGGYAEKVSV
101: PAGQIFPIPA GISLKDAAAF PEVACTVWST VFMMGRLSVG ESFLIHGGSS GIGTFAIQIA KHLGVRVFVT AGSDEKLAAC KELGADVCIN YKTEDFVAKV
201: KAETDGKGVD VILDCIGAPY LQKNLDSLNF DGRLCIIGLM GGANAEIKLS SLLPKRLTVL GAALRPRSPE NKAVVVREVE KNVWPAIEAG KVKPVIYKYL
301: PLSQAAEGHS LMESSNHIGK ILLET

Arabidopsis Description

AT4g21580/F18E5_200 [Source:UniProtKB/TrEMBL;Acc:O65423]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.