CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051987_P001	Maize	cytosol	85.37	91.5
Os02t0805600-01	Rice	plasma membrane	86.89	86.89
TraesCS6D01G358100.1	Wheat	peroxisome	85.98	86.24
TraesCS6B01G411600.1	Wheat	peroxisome	85.37	85.63
TraesCS6A01G373900.1	Wheat	golgi	85.06	85.32
TraesCS6D01G358200.1	Wheat	cytosol	83.84	84.1
TraesCS6B01G411700.1	Wheat	cytosol	81.71	81.96
TraesCS6A01G374000.1	Wheat	cytosol	76.52	77.71
GSMUA_Achr4P15790_001	Banana	cytosol	76.83	77.54
HORVU6Hr1G088160.7	Barley	cytosol, mitochondrion, peroxisome	81.71	76.79
PGSC0003DMT400057744	Potato	cytosol	74.39	75.08
Solyc02g078940.2.1	Tomato	extracellular	73.78	74.46
KRH10765	Soybean	cytosol, peroxisome, plastid	72.26	72.92
CDX82839	Canola	cytosol	69.51	70.15
AT4G21580.1	Thale cress	cytosol	69.21	69.85
Bra013540.1-P	Field mustard	cytosol	68.9	69.54
CDX79076	Canola	cytosol, peroxisome, plastid	39.02	63.68
VIT_09s0002g07820.t01	Wine grape	cytosol	22.26	63.48
EER97004	Sorghum	cytosol, peroxisome, plastid	28.35	27.27
OQU89739	Sorghum	cytosol	27.74	26.69
OQU83589	Sorghum	cytosol	25.3	26.18
EES10573	Sorghum	plastid	26.52	25.29
KXG40429	Sorghum	plastid	29.57	25.26
EES12890	Sorghum	plastid	26.22	24.86
KXG25078	Sorghum	plastid	26.22	21.5
KXG33382	Sorghum	plastid	25.91	20.29

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	EntrezGene:8056412	UniProt:A0A1Z5RQ67	InterPro:ADH_C
InterPro:ADH_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	EnsemblPlants:OQU85913	ProteinID:OQU85913	ProteinID:OQU85913.1	PFAM:PF00107
PFAM:PF08240	InterPro:PKS_ER	PANTHER:PTHR43006	PANTHER:PTHR43006:SF7	InterPro:Quinone_OxRdtase_PIG3	SMART:SM00829
EnsemblPlantsGene:SORBI_3004G337200	SUPFAM:SSF50129	SUPFAM:SSF51735	TIGRFAMs:TIGR02824	UniParc:UPI0001A85BDD	RefSeq:XP_002453006.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:66883866..66886330

Molecular Weight (calculated)

34289.5 Da

IEP (calculated)

6.169

GRAVY (calculated)

0.120

Length

328 amino acids

Sequence
(BLAST)

001: MRAVVITRGG GGPEVLEAQE VEEPAPLGDG EVLLQVAAAG VNRADTLQRH GRHPPPPGAP PYPGLECSGT ILALGPNVPP RWSVGDKVCA LLSGGGYAEK
101: VVVPAGQLLP VPEGVSLTDA AGLPEVACTV WSTVFMTSHL SPGESFLIHG GSSGIGTFAI QIAKHLGIKV FITAGSEEKL AACKDLGADV CINYKTEDFV
201: ERVKQETDGK GVDVILDNIG GPYLQRNLNS LGVDGRLFII GFQGGAVTEV NLQAVLARRL TIQAAGLRNR SLANKAEIVG EVEKNVWPAV AAGKVKPVIY
301: KTFPLSEAAE AHRLMEASTH IGKILLLP

Best Arabidopsis Sequence Match ( AT4G21580.1 )
(BLAST)

001: MKAIVISEPG KPEVLQLRDV ADPEVKDDEV LIRVLATALN RADTLQRLGL YNPPPGSSPY LGLECSGTIE SVGKGVSRWK VGDQVCALLS GGGYAEKVSV
101: PAGQIFPIPA GISLKDAAAF PEVACTVWST VFMMGRLSVG ESFLIHGGSS GIGTFAIQIA KHLGVRVFVT AGSDEKLAAC KELGADVCIN YKTEDFVAKV
201: KAETDGKGVD VILDCIGAPY LQKNLDSLNF DGRLCIIGLM GGANAEIKLS SLLPKRLTVL GAALRPRSPE NKAVVVREVE KNVWPAIEAG KVKPVIYKYL
301: PLSQAAEGHS LMESSNHIGK ILLET

Arabidopsis Description

AT4g21580/F18E5_200 [Source:UniProtKB/TrEMBL;Acc:O65423]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.