CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
plastid 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU83589	Sorghum	cytosol	78.49	85.17
Zm00001d025166_P001	Maize	plastid	89.24	83.2
TraesCS2A01G277900.1	Wheat	golgi	79.07	81.19
TraesCS2B01G295300.1	Wheat	golgi	79.07	81.19
TraesCS2D01G276900.1	Wheat	plastid	78.49	80.6
TraesCS7D01G143400.1	Wheat	cytosol	70.93	78.46
TraesCS7B01G043400.1	Wheat	cytosol, peroxisome, plastid	74.42	76.19
TraesCS5D01G524500.1	Wheat	mitochondrion, peroxisome, plastid	74.71	75.59
HORVU2Hr1G042270.1	Barley	cytosol, plastid	32.56	74.67
TraesCS7A01G142200.1	Wheat	cytosol, peroxisome, plastid	61.92	73.96
TraesCS5A01G014100.1	Wheat	plastid	71.22	72.92
Os04t0372700-01	Rice	plasma membrane	26.74	71.32
Solyc09g059030.2.1	Tomato	plastid	65.12	68.09
PGSC0003DMT400062565	Potato	cytosol, peroxisome, plastid	65.12	68.09
VIT_07s0151g00200.t01	Wine grape	cytosol, mitochondrion, plastid	47.97	66.53
AT4G13010.1	Thale cress	cytosol	63.08	65.96
Bra001207.1-P	Field mustard	cytosol	62.5	65.35
CDX80695	Canola	cytosol	62.5	65.35
CDY34537	Canola	cytosol	62.5	65.35
GSMUA_Achr11P...	Banana	plasma membrane	62.5	65.15
Solyc09g059020.2.1	Tomato	cytosol, extracellular, peroxisome	51.74	64.96
PGSC0003DMT400044064	Potato	cytosol	61.34	64.13
Solyc09g059040.2.1	Tomato	plastid	61.34	64.13
OQU89739	Sorghum	cytosol	63.08	63.64
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	48.84	63.4
PGSC0003DMT400022514	Potato	cytosol	60.17	62.73
KRH23756	Soybean	endoplasmic reticulum	59.59	62.5
PGSC0003DMT400044065	Potato	cytosol	59.88	62.05
KRG99627	Soybean	cytosol	59.3	62.01
VIT_07s0151g00260.t01	Wine grape	cytosol	60.47	61.54
KRH46629	Soybean	cytosol	58.72	61.4
KRH44933	Soybean	cytosol, peroxisome	50.87	58.72
VIT_07s0151g00090.t01	Wine grape	mitochondrion	63.95	57.44
EER97004	Sorghum	cytosol, peroxisome, plastid	54.07	54.55
PGSC0003DMT400090732	Potato	plastid	22.97	35.91
OQU85913	Sorghum	cytosol	25.29	26.52
KXG25078	Sorghum	plastid	29.94	25.75
EES12890	Sorghum	plastid	23.84	23.7
KXG33382	Sorghum	plastid	25.87	21.24
KXG40429	Sorghum	plastid	22.97	20.57

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	EntrezGene:8086479	InterPro:ADH_N	UniProt:C5YDV5
EnsemblPlants:EES10573	ProteinID:EES10573	ProteinID:EES10573.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF08240
PFAM:PF13602	InterPro:PKS_ER	PANTHER:PTHR44013	PANTHER:PTHR44013:SF3	SMART:SM00829	EnsemblPlantsGene:SORBI_3006G041000
SUPFAM:SSF50129	SUPFAM:SSF51735	unigene:Sbi.15037	UniParc:UPI0001A86C0F	RefSeq:XP_002446245.1	SEG:seg

Description

hypothetical protein

Coordinates

chr6:+:26379212..26383438

Molecular Weight (calculated)

35937.8 Da

IEP (calculated)

8.988

GRAVY (calculated)

0.209

Length

344 amino acids

Sequence
(BLAST)

001: MADAAAAAAP TKTANIPTTM RAVQYDAYGG GATGLKHVEV PVPMAKKNEL LLKLEAASIN PVDWKIQKGL LQPFLPRKFP FIPVTDVAGV VADVGPGING
101: FQAGDQVVAM LNSLNGGGLA EYAVASENLT VKRPPEVSAA EGAGLPIAAG TALQVLRTIG AKFDGTGQPL NVLITAASGG VGLYAVQLAK LAGLHITATC
201: GARNVELVKS LGADEVLDYR TPEGAILQSP SGKKYDGVVH CTVGISWSTF EPVLATNGRV IDITPNFTVF LKSALHKVTF AKKRLVPLLL SPNKADLEFL
301: VGLLKDGNLK TLIDSRFPLS EVSKAWEKSI EGHATGKIIV EMVG

Best Arabidopsis Sequence Match ( AT4G13010.1 )
(BLAST)

001: MAGKLMHALQ YNSYGGGAAG LEHVQVPVPT PKSNEVCLKL EATSLNPVDW KIQKGMIRPF LPRKFPCIPA TDVAGEVVEV GSGVKNFKAG DKVVAVLSHL
101: GGGGLAEFAV ATEKLTVKRP QEVGAAEAAA LPVAGLTALQ ALTNPAGLKL DGTGKKANIL VTAASGGVGH YAVQLAKLAN AHVTATCGAR NIEFVKSLGA
201: DEVLDYKTPE GAALKSPSGK KYDAVVHCAN GIPFSVFEPN LSENGKVIDI TPGPNAMWTY AVKKITMSKK QLVPLLLIPK AENLEFMVNL VKEGKVKTVI
301: DSKHPLSKAE DAWAKSIDGH ATGKIIVEP

Arabidopsis Description

CEQORHChloroplast envelope quinone oxidoreductase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9SV68]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.