CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 3
mitochondrion 2
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042260_P002	Maize	mitochondrion	86.22	79.03
Zm00001d006069_P001	Maize	peroxisome	85.34	78.23
TraesCS5B01G279700.1	Wheat	plastid	69.79	69.79
Os09t0502500-01	Rice	plasma membrane	68.62	68.82
TraesCS5A01G280700.1	Wheat	plastid	68.92	68.51
HORVU5Hr1G075540.2	Barley	peroxisome, plastid	68.04	67.25
HORVU5Hr1G034160.1	Barley	cytosol, plastid	38.42	64.22
OQU89739	Sorghum	cytosol	63.93	63.93
TraesCS5D01G287300.2	Wheat	plastid	68.92	63.86
PGSC0003DMT400062565	Potato	cytosol, peroxisome, plastid	56.3	58.36
Solyc09g059030.2.1	Tomato	plastid	56.01	58.05
PGSC0003DMT400044064	Potato	cytosol	55.72	57.75
KRG99627	Soybean	cytosol	54.84	56.84
VIT_07s0151g00200.t01	Wine grape	cytosol, mitochondrion, plastid	41.06	56.45
Solyc09g059040.2.1	Tomato	plastid	54.25	56.23
PGSC0003DMT400022514	Potato	cytosol	53.96	55.76
KRH46629	Soybean	cytosol	53.08	55.02
OQU83589	Sorghum	cytosol	51.03	54.89
Solyc09g059020.2.1	Tomato	cytosol, extracellular, peroxisome	43.99	54.74
AT4G13010.1	Thale cress	cytosol	52.79	54.71
PGSC0003DMT400044065	Potato	cytosol	53.08	54.52
KRH23756	Soybean	endoplasmic reticulum	52.2	54.27
CDY34537	Canola	cytosol	52.2	54.1
CDX80695	Canola	cytosol	52.2	54.1
Bra001207.1-P	Field mustard	cytosol	52.2	54.1
EES10573	Sorghum	plastid	54.55	54.07
VIT_07s0151g00260.t01	Wine grape	cytosol	52.79	53.25
KRH44933	Soybean	cytosol, peroxisome	43.99	50.34
VIT_07s0151g00090.t01	Wine grape	mitochondrion	54.84	48.83
PGSC0003DMT400090732	Potato	plastid	19.65	30.45
OQU85913	Sorghum	cytosol	27.27	28.35
KXG33382	Sorghum	plastid	29.03	23.63
KXG25078	Sorghum	plastid	27.27	23.25
EES12890	Sorghum	plastid	23.17	22.83
KXG40429	Sorghum	plastid	23.17	20.57

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	EntrezGene:8058963	InterPro:ADH_N	UniProt:C5X4N2
EnsemblPlants:EER97004	ProteinID:EER97004	ProteinID:EER97004.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF08240
PFAM:PF13602	InterPro:PKS_ER	PANTHER:PTHR44013	PANTHER:PTHR44013:SF2	SMART:SM00829	EnsemblPlantsGene:SORBI_3002G255700
SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0001A83820	RefSeq:XP_002460483.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:+:64207057..64208709

Molecular Weight (calculated)

35577.3 Da

IEP (calculated)

10.050

GRAVY (calculated)

0.154

Length

341 amino acids

Sequence
(BLAST)

001: MAAPSGTMRA VQYDRYGGGA QGLKQVEVPI PSPKKGEVLI RMEATSINVV DCRFKNGIAR PFMPWKFPFI SGFDLAGEVV ALGAAVSGFK PGDKVIAINF
101: PNGGGLAEYA VVSASRTVAR PPEVSAVDGV CVPMAAVTAL LALRRAGVSV SLDTTTTTTT RPKNVLVTAA SGAVGHFAVQ LARMGGHSVT ATCGARNLGL
201: VRSLGADEAL DYKTPDGAKL RSPSGREYDA VVHCATGFPW SVFRPVLAAK GTVVDITPGF VSGVTAILQM LTFSKKRLVP LLAASKKEDM ELLLGMLEQG
301: RLKPVIDSRH PLGSAHEGWA KSMSGHATGK VVVEIGAAQP E

Best Arabidopsis Sequence Match ( AT4G13010.1 )
(BLAST)

001: MAGKLMHALQ YNSYGGGAAG LEHVQVPVPT PKSNEVCLKL EATSLNPVDW KIQKGMIRPF LPRKFPCIPA TDVAGEVVEV GSGVKNFKAG DKVVAVLSHL
101: GGGGLAEFAV ATEKLTVKRP QEVGAAEAAA LPVAGLTALQ ALTNPAGLKL DGTGKKANIL VTAASGGVGH YAVQLAKLAN AHVTATCGAR NIEFVKSLGA
201: DEVLDYKTPE GAALKSPSGK KYDAVVHCAN GIPFSVFEPN LSENGKVIDI TPGPNAMWTY AVKKITMSKK QLVPLLLIPK AENLEFMVNL VKEGKVKTVI
301: DSKHPLSKAE DAWAKSIDGH ATGKIIVEP

Arabidopsis Description

CEQORHChloroplast envelope quinone oxidoreductase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9SV68]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.