Factsheet for TraesCS5B01G279700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

peroxisome 1
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G280700.1	Wheat	plastid	94.13	93.59
HORVU5Hr1G075540.2	Barley	peroxisome, plastid	92.08	91.01
TraesCS5D01G287300.2	Wheat	plastid	94.43	87.5
HORVU5Hr1G034160.1	Barley	cytosol, plastid	49.85	83.33
Os09t0502500-01	Rice	plasma membrane	70.67	70.88
EER97004	Sorghum	cytosol, peroxisome, plastid	69.79	69.79
Zm00001d042260_P002	Maize	mitochondrion	70.67	64.78
TraesCS5B01G279900.1	Wheat	golgi	63.64	64.58
Zm00001d006069_P001	Maize	peroxisome	69.21	63.44
Solyc09g059030.2.1	Tomato	plastid	57.48	59.57
PGSC0003DMT400062565	Potato	cytosol, peroxisome, plastid	57.18	59.27
PGSC0003DMT400044064	Potato	cytosol	56.6	58.66
TraesCS2B01G295300.1	Wheat	golgi	57.18	58.21
Solyc09g059040.2.1	Tomato	plastid	55.43	57.45
KRG99627	Soybean	cytosol	54.55	56.53
KRH23756	Soybean	endoplasmic reticulum	53.67	55.79
VIT_07s0151g00200.t01	Wine grape	cytosol, mitochondrion, plastid	40.47	55.65
Solyc09g059020.2.1	Tomato	cytosol, extracellular, peroxisome	44.57	55.47
PGSC0003DMT400022514	Potato	cytosol	53.67	55.45
TraesCS7B01G043400.1	Wheat	cytosol, peroxisome, plastid	54.55	55.36
AT4G13010.1	Thale cress	cytosol	53.37	55.32
KRH46629	Soybean	cytosol	53.37	55.32
TraesCS3B01G548400.1	Wheat	cytosol, peroxisome, plastid	34.9	54.59
VIT_07s0151g00260.t01	Wine grape	cytosol	53.96	54.44
Bra001207.1-P	Field mustard	cytosol	52.2	54.1
CDX80695	Canola	cytosol	52.2	54.1
CDY34537	Canola	cytosol	52.2	54.1
PGSC0003DMT400044065	Potato	cytosol	52.49	53.92
TraesCS2B01G295100.1	Wheat	plastid	49.85	52.31
TraesCS2B01G295200.1	Wheat	plastid	49.27	51.06
KRH44933	Soybean	cytosol, peroxisome	44.57	51.01
VIT_07s0151g00090.t01	Wine grape	mitochondrion	56.3	50.13
PGSC0003DMT400090732	Potato	plastid	20.23	31.36
TraesCS6B01G411600.1	Wheat	peroxisome	28.74	29.97
TraesCS6B01G411700.1	Wheat	cytosol	27.86	29.05
TraesCS3B01G326600.1	Wheat	mitochondrion	29.33	27.55
TraesCS6B01G161600.1	Wheat	plastid	29.33	26.11
TraesCS6B01G277800.1	Wheat	peroxisome	24.05	23.7
TraesCS4B01G371900.1	Wheat	mitochondrion, plastid	22.58	19.9

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf
PFAM:PF08240	PFAM:PF13602	InterPro:PKS_ER	PANTHER:PTHR44013	PANTHER:PTHR44013:SF2	SMART:SM00829
SUPFAM:SSF50129	SUPFAM:SSF51735	EnsemblPlantsGene:TraesCS5B01G279700	EnsemblPlants:TraesCS5B01G279700.1	TIGR:cd08267	SEG:seg

Description

No Description!

Coordinates

chr5B:+:465254874..465256073

Molecular Weight (calculated)

35162.3 Da

IEP (calculated)

7.284

GRAVY (calculated)

0.152

Length

341 amino acids

Sequence
(BLAST)

001: MASSSSSRTM RAVQYDRYGG GADGLKHVEV PIPSPKKGEL LLRMEAASIN RVDWNFQNGK ARPVLPSKFP FIPVCELAGE VVELGAGVSG FSQGDKVIAV
101: NFPGGGGLAE YAVVPASQAA LRPAEVSAVE GACLPIAAFT ALAALRTAGV GLDAGDGPPK NVLVTAASGG VGTFAVQLAS LAGHHHVTAT CGARNLDLVR
201: SLGADEALDY GTPEGAALRG PSGRKHDAVV HCGEGFPWSA FEPALADAGG VVVDLTPRLA SVAVAVLHWV FFSRKKLVPL IAAAKKEDME ALLGMVSQGK
301: LQVVIDSRYP LSRAHEGWAK SMSGHATGKV VVDMGIADAR E

Best Arabidopsis Sequence Match ( AT4G13010.1 )
(BLAST)

001: MAGKLMHALQ YNSYGGGAAG LEHVQVPVPT PKSNEVCLKL EATSLNPVDW KIQKGMIRPF LPRKFPCIPA TDVAGEVVEV GSGVKNFKAG DKVVAVLSHL
101: GGGGLAEFAV ATEKLTVKRP QEVGAAEAAA LPVAGLTALQ ALTNPAGLKL DGTGKKANIL VTAASGGVGH YAVQLAKLAN AHVTATCGAR NIEFVKSLGA
201: DEVLDYKTPE GAALKSPSGK KYDAVVHCAN GIPFSVFEPN LSENGKVIDI TPGPNAMWTY AVKKITMSKK QLVPLLLIPK AENLEFMVNL VKEGKVKTVI
301: DSKHPLSKAE DAWAKSIDGH ATGKIIVEP

Arabidopsis Description

CEQORHChloroplast envelope quinone oxidoreductase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9SV68]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.