Factsheet for TraesCS4B01G371900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G365600.1	Wheat	plastid	94.83	96.07
TraesCS5A01G542400.1	Wheat	plastid	93.54	95.77
HORVU4Hr1G088610.1	Barley	plastid	88.11	90.45
Os03t0101600-01	Rice	plasma membrane	70.03	78.55
Zm00001d027276_P001	Maize	extracellular	73.64	76.61
PGSC0003DMT400055608	Potato	cytosol, peroxisome, plastid	63.31	74.92
VIT_09s0002g08480.t01	Wine grape	cytosol	63.82	74.62
KXG40429	Sorghum	plastid	73.9	74.48
Bra035926.1-P	Field mustard	cytosol	61.76	73.77
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane, vacuole	54.52	73.52
CDY16814	Canola	cytosol	17.05	73.33
CDX87218	Canola	cytosol	16.54	71.11
VIT_09s0002g08470.t01	Wine grape	cytosol	59.69	69.37
KRH27530	Soybean	nucleus	63.57	65.43
Solyc06g034120.2.1	Tomato	extracellular	64.6	65.1
AT5G61510.1	Thale cress	plastid	63.82	60.84
CDY68244	Canola	mitochondrion	26.87	57.14
CDY72063	Canola	plastid	27.65	50.95
TraesCS6B01G411700.1	Wheat	cytosol	27.39	32.42
TraesCS6B01G411600.1	Wheat	peroxisome	26.61	31.5
TraesCS6B01G277800.1	Wheat	peroxisome	23.51	26.3
TraesCS3B01G548400.1	Wheat	cytosol, peroxisome, plastid	13.44	23.85
TraesCS5B01G279900.1	Wheat	golgi	20.67	23.81
TraesCS2B01G295200.1	Wheat	plastid	19.64	23.1
TraesCS5B01G279700.1	Wheat	plastid	19.9	22.58
TraesCS2B01G295300.1	Wheat	golgi	19.12	22.09
TraesCS6B01G161600.1	Wheat	plastid	21.71	21.93
TraesCS2B01G295100.1	Wheat	plastid	17.57	20.92
TraesCS7B01G043400.1	Wheat	cytosol, peroxisome, plastid	17.57	20.24
TraesCS3B01G326600.1	Wheat	mitochondrion	18.86	20.11

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C	InterPro:ADH_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0008150	GO:GO:0008152	GO:GO:0009628	GO:GO:0009644	GO:GO:0016491	GO:GO:0055114
InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	PANTHER:PTHR42975
SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	EnsemblPlantsGene:TraesCS4B01G371900	EnsemblPlants:TraesCS4B01G371900.1	TIGR:cd05286
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:657185169..657188101

Molecular Weight (calculated)

40913.3 Da

IEP (calculated)

8.376

GRAVY (calculated)

-0.001

Length

387 amino acids

Sequence
(BLAST)

001: MEGGTRTGSM TLTPRSTHLA PSQSVFYSPS PVATPVAVTP RRSNSHPAAR LRLRCCCSAG DPAAMVKAIR VHELGGPEAL RWEEVEVGEP GDGEIRIRNT
101: AIGVNFIDVY FRKGVYPAPL PFTPGMEAVG VVTAVGPGLT GRKVGDVVAY AGKPMGSYAE EQIIPADVAV PVPPKVDHKT AAAIMLKGMT VHMLVRRIFK
201: VETGHTVLVH AAAGGVGSLL CQWANALGAT VIGTVSNEEK ATHAHFDGCH HVIMYTKEDV ATRVKEITGG KGVNVVYDSV GKDTYKASLE CLASRGFLVS
301: FGQSSGSPDP ISMGDLASKS LFLTRPSVMH YTGTRDELLE AAGEVFANVA NGVLHTRVKH TYPLSEAARA HADLEARKTS GSVLLIP

Best Arabidopsis Sequence Match ( AT5G61510.1 )
(BLAST)

001: MAALTLHHHH HHRHHSCLQA SGHLSRRLYH RIFSSFPRNP VKDLNFRLSL ADFSSFSLST RGTVFAVRAL STVAVEESSE KKMVKGIRVY EHGGPEVLKW
101: EDVEVGEPKE GEIRVKNKAI GLNFIDVYFR KGVYKPASMP FTPGMEAVGE VVAVGSGLTG RMIGDLVAYA GNPMGAYAEE QILPADKVVP VPSSIDPIVA
201: ASIMLKGMTA QFLLRRCFKV EPGHTILVHA AAGGVGSLLC QWANALGATV IGTVSTNEKA AQAKEDGCHH VIMYKNEDFV SRVNDITSGK GVNVVYDSVG
301: KDTFKGSLAC LKSRGYMVSF GQSSGSPDPI PLSDLAPKSL FLTRPSMMHY NETRDELLEC AGEVFANVTS GILKARVNHK YPLSRVADAH ADLENRITSG
401: SVVLLP

Arabidopsis Description

At5g61510 [Source:UniProtKB/TrEMBL;Acc:A1L4Y4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.