Factsheet for TraesCS4D01G365600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G542400.1	Wheat	plastid	95.29	96.3
TraesCS4B01G371900.1	Wheat	mitochondrion, plastid	96.07	94.83
HORVU4Hr1G088610.1	Barley	plastid	89.01	90.19
Os03t0101600-01	Rice	plasma membrane	70.42	77.97
Zm00001d027276_P001	Maize	extracellular	74.61	76.61
PGSC0003DMT400055608	Potato	cytosol, peroxisome, plastid	64.4	75.23
VIT_09s0002g08480.t01	Wine grape	cytosol	64.66	74.62
KXG40429	Sorghum	plastid	74.87	74.48
Bra035926.1-P	Field mustard	cytosol	62.3	73.46
CDY16814	Canola	cytosol	17.28	73.33
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane, vacuole	54.97	73.17
CDX87218	Canola	cytosol	16.75	71.11
VIT_09s0002g08470.t01	Wine grape	cytosol	61.26	70.27
KRH27530	Soybean	nucleus	64.66	65.69
Solyc06g034120.2.1	Tomato	extracellular	65.71	65.36
AT5G61510.1	Thale cress	plastid	64.4	60.59
CDY68244	Canola	mitochondrion	27.49	57.69
CDY72063	Canola	plastid	28.27	51.43
TraesCS6D01G358200.1	Wheat	cytosol	27.49	32.11
TraesCS6D01G358100.1	Wheat	peroxisome	26.96	31.5
TraesCS6D01G229000.1	Wheat	peroxisome	23.56	26.01
TraesCS5D01G287700.1	Wheat	golgi	21.2	24.11
TraesCS2D01G276700.1	Wheat	mitochondrion	19.37	22.36
TraesCS6D01G122800.1	Wheat	plastid	22.25	22.19
TraesCS3D01G494500.1	Wheat	cytosol, peroxisome, plastid	18.85	21.88
TraesCS5D01G287300.2	Wheat	plastid	20.68	21.47
TraesCS2D01G276600.1	Wheat	cytosol, mitochondrion, plastid	18.06	21.23
TraesCS2D01G276900.1	Wheat	plastid	18.59	21.19
TraesCS5D01G524500.1	Wheat	mitochondrion, peroxisome, plastid	18.59	20.88
TraesCS3D01G291700.2	Wheat	mitochondrion	18.85	19.83
TraesCS7D01G143400.1	Wheat	cytosol	15.97	19.61

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C	InterPro:ADH_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0008150	GO:GO:0008152	GO:GO:0009628	GO:GO:0009644	GO:GO:0016491	GO:GO:0055114
InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	PANTHER:PTHR42975
SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	EnsemblPlantsGene:TraesCS4D01G365600	EnsemblPlants:TraesCS4D01G365600.1	TIGR:cd05286
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4D:+:509645788..509648653

Molecular Weight (calculated)

40545.0 Da

IEP (calculated)

8.775

GRAVY (calculated)

0.024

Length

382 amino acids

Sequence
(BLAST)

001: MTLTPRSTRL APFQSVFSSP SPAATPVAVT PRRSNSHPAA RLHLRLRLRC CCSASDPAPM VKAIRVHELG GPEALRWEDV EVGEPGDGEI RIRNTAIGVN
101: FIDVYFRKGV YPAPLPFTPG MEAVGVVTAV GPGLTGRKVG DVVAYAGKPM GSYAEEQIIP ADVAVPVPPS VNHKTAAAIM LKGMTVHMLV RRIFKVETGH
201: TVLVHAAAGG VGSLLCQWAN ALGATVIGTV SNEEKATHAH FDGCHHMIIY TKEDVATRVK EITGGKGVNV VYDSVGKDTY KASLECLASR GFLVSFGQSS
301: GSPDPISMGD LASKSLFLTR PSVMHYTGTR DELLEAAGEV FANVANGVLH TRVKHTYPLS EAARAHADLE ARKTSGSVLL IP

Best Arabidopsis Sequence Match ( AT5G61510.1 )
(BLAST)

001: MAALTLHHHH HHRHHSCLQA SGHLSRRLYH RIFSSFPRNP VKDLNFRLSL ADFSSFSLST RGTVFAVRAL STVAVEESSE KKMVKGIRVY EHGGPEVLKW
101: EDVEVGEPKE GEIRVKNKAI GLNFIDVYFR KGVYKPASMP FTPGMEAVGE VVAVGSGLTG RMIGDLVAYA GNPMGAYAEE QILPADKVVP VPSSIDPIVA
201: ASIMLKGMTA QFLLRRCFKV EPGHTILVHA AAGGVGSLLC QWANALGATV IGTVSTNEKA AQAKEDGCHH VIMYKNEDFV SRVNDITSGK GVNVVYDSVG
301: KDTFKGSLAC LKSRGYMVSF GQSSGSPDPI PLSDLAPKSL FLTRPSMMHY NETRDELLEC AGEVFANVTS GILKARVNHK YPLSRVADAH ADLENRITSG
401: SVVLLP

Arabidopsis Description

At5g61510 [Source:UniProtKB/TrEMBL;Acc:A1L4Y4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.