Factsheet for Zm00001d027276_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 5
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	peroxisome, plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	vacuole

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG40429	Sorghum	plastid	91.67	88.8
Os03t0101600-01	Rice	plasma membrane	73.39	79.13
PGSC0003DMT400055608	Potato	cytosol, peroxisome, plastid	66.94	76.15
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane, vacuole	58.33	75.61
CDY16814	Canola	cytosol	18.28	75.56
VIT_09s0002g08480.t01	Wine grape	cytosol	66.94	75.23
Bra035926.1-P	Field mustard	cytosol	65.32	75.0
TraesCS5A01G542400.1	Wheat	plastid	76.08	74.87
TraesCS4D01G365600.1	Wheat	plastid	76.61	74.61
HORVU4Hr1G088610.1	Barley	plastid	75.0	74.01
TraesCS4B01G371900.1	Wheat	mitochondrion, plastid	76.61	73.64
CDX87218	Canola	cytosol	17.74	73.33
VIT_09s0002g08470.t01	Wine grape	cytosol	63.71	71.17
KRH27530	Soybean	nucleus	69.09	68.35
Solyc06g034120.2.1	Tomato	extracellular	67.47	65.36
AT5G61510.1	Thale cress	plastid	67.2	61.58
CDY68244	Canola	mitochondrion	26.61	54.4
CDY72063	Canola	plastid	27.42	48.57
Zm00001d051987_P001	Maize	cytosol	26.34	32.03
Zm00001d018418_P002	Maize	cytosol	26.34	28.82
Zm00001d002246_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	23.39	24.86
Zm00001d021025_P001	Maize	mitochondrion, peroxisome, plastid	23.12	24.86
Zm00001d025166_P001	Maize	plastid	22.04	22.22
Zm00001d006069_P001	Maize	peroxisome	21.24	21.24
Zm00001d043432_P001	Maize	mitochondrion	20.43	20.94
Zm00001d042260_P002	Maize	mitochondrion	20.43	20.43
Zm00001d032332_P001	Maize	plastid	20.16	19.43

Protein Annotations

EntrezGene:103630457	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	UniProt:A0A1D6JJP0	InterPro:ADH_C
InterPro:ADH_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0009628	GO:GO:0009644
GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	ProteinID:ONL92525.1	PFAM:PF00107
PFAM:PF08240	InterPro:PKS_ER	PANTHER:PTHR42975	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735
SignalP:SignalP-noTM	UniParc:UPI0004DE7D0A	EnsemblPlantsGene:Zm00001d027276	EnsemblPlants:Zm00001d027276_P001	EnsemblPlants:Zm00001d027276_T001	SEG:seg

Description

GroES-like zinc-binding alcohol dehydrogenase family protein

Coordinates

chr1:-:1226063..1236227

Molecular Weight (calculated)

39463.5 Da

IEP (calculated)

8.333

GRAVY (calculated)

0.062

Length

372 amino acids

Sequence
(BLAST)

001: MSAFSSLLLP SFFLFPGQPL QLLPNPPTRF SRLRCHRRDS TSVATMVKSK AIRVHELGGP EVLRWEEVEV GEPGEGEIRI RTTAVGVNFI DIYFRKGVYA
101: APTMPFTPGM EAVGVVTAVG PGLTGRKVGD VVAYAGNPMG SYAQEQILPA AVAVPVPPSV DHKQAASVML KGMTAHVLLR RVFKVESGHT ILVHAAAGGV
201: GSLLCQWANA LGATVIGTVS NQEKAAQAAQ DGCHHPIIYT SEDVVARVKD ITSGKGVNVV YDSVGKDTYK ASLECLASRG FLVSFGQSSG KPDPIPTSDL
301: ASKSLFLTRP SLMHYTATRD ELLESAGEVF ANVANGVLHV RVNHTYPLSE AAQAHADLEG RKTSGSIVLI PG

Best Arabidopsis Sequence Match ( AT5G61510.1 )
(BLAST)

001: MAALTLHHHH HHRHHSCLQA SGHLSRRLYH RIFSSFPRNP VKDLNFRLSL ADFSSFSLST RGTVFAVRAL STVAVEESSE KKMVKGIRVY EHGGPEVLKW
101: EDVEVGEPKE GEIRVKNKAI GLNFIDVYFR KGVYKPASMP FTPGMEAVGE VVAVGSGLTG RMIGDLVAYA GNPMGAYAEE QILPADKVVP VPSSIDPIVA
201: ASIMLKGMTA QFLLRRCFKV EPGHTILVHA AAGGVGSLLC QWANALGATV IGTVSTNEKA AQAKEDGCHH VIMYKNEDFV SRVNDITSGK GVNVVYDSVG
301: KDTFKGSLAC LKSRGYMVSF GQSSGSPDPI PLSDLAPKSL FLTRPSMMHY NETRDELLEC AGEVFANVTS GILKARVNHK YPLSRVADAH ADLENRITSG
401: SVVLLP

Arabidopsis Description

At5g61510 [Source:UniProtKB/TrEMBL;Acc:A1L4Y4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.