CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68244	Canola	mitochondrion	83.81	96.7
AT5G61510.1	Thale cress	plastid	86.67	44.83
Bra035926.1-P	Field mustard	cytosol	65.71	42.59
PGSC0003DMT400055608	Potato	cytosol, peroxisome, plastid	56.67	36.39
Solyc06g034120.2.1	Tomato	extracellular	59.05	32.29
VIT_09s0002g08480.t01	Wine grape	cytosol	50.48	32.02
KRH27530	Soybean	nucleus	57.14	31.91
VIT_09s0002g08470.t01	Wine grape	cytosol	48.1	30.33
Os03t0101600-01	Rice	plasma membrane	48.1	29.28
HORVU4Hr1G088610.1	Barley	plastid	51.9	28.91
TraesCS5A01G542400.1	Wheat	plastid	51.43	28.57
TraesCS4D01G365600.1	Wheat	plastid	51.43	28.27
TraesCS4B01G371900.1	Wheat	mitochondrion, plastid	50.95	27.65
Zm00001d027276_P001	Maize	extracellular	48.57	27.42
KXG40429	Sorghum	plastid	49.05	26.82
CDX79076	Canola	cytosol, peroxisome, plastid	20.48	21.39
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane, vacuole	29.05	21.25
CDX82839	Canola	cytosol	20.95	13.54
CDY34537	Canola	cytosol	20.48	13.07
CDX80695	Canola	cytosol	20.48	13.07
CDY61544	Canola	plastid	21.9	11.95
CDY47631	Canola	plastid	21.43	11.69
CDY32016	Canola	peroxisome	17.14	10.34
CDX82448	Canola	mitochondrion	16.67	10.0
CDX75808	Canola	mitochondrion	16.67	10.0
CDX97630	Canola	plastid	20.0	6.64
CDX98523	Canola	plastid	19.52	6.48
CDX67648	Canola	extracellular	2.86	2.68
CDY16814	Canola	cytosol	0.48	1.11
CDX87218	Canola	cytosol	0.48	1.11

Protein Annotations

EnsemblPlants:CDY72063	EnsemblPlantsGene:GSBRNA2T00023416001	Gene3D:3.90.180.10	GO:A0A078JWM1	GO:GO:0008150	GO:GO:0008152
GO:GO:0055114	InterPro:ADH_N	InterPro:GroES-like_sf	PANTHER:PTHR42975	PFAM:PF08240	ProteinID:CDY72063
ProteinID:CDY72063.1	SEG:seg	SUPFAM:SSF50129	UniParc:UPI0004EE1551	UniProt:A0A078JWM1	MapMan:35.2

Description

BnaCnng75810DBnaCnng75810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JWM1]

Coordinates

chrLK048766:-:374..1452

Molecular Weight (calculated)

22837.9 Da

IEP (calculated)

9.763

GRAVY (calculated)

-0.007

Length

210 amino acids

Sequence
(BLAST)

001: MAALTLHHLS CLQASRHLSL PHRTLSSFPR NPVKNLIFRQ NLAESSSFRL STVAVKALST VAVEDSSEKK MVKGIRVYEH GGPEVLKWED IEVGEPKDGE
101: IRVKNKAIGL NFIDVYYRKG VYKPASMPFT PGMEAVGEVV AVGSGLTGRK VGDLVAYAGS PMGAYAEEQI LPADKVVPVP SSMDPIVAAS IMLKGMTAQF
201: LLRRCFKVSH

Best Arabidopsis Sequence Match ( AT5G61510.1 )
(BLAST)

001: MAALTLHHHH HHRHHSCLQA SGHLSRRLYH RIFSSFPRNP VKDLNFRLSL ADFSSFSLST RGTVFAVRAL STVAVEESSE KKMVKGIRVY EHGGPEVLKW
101: EDVEVGEPKE GEIRVKNKAI GLNFIDVYFR KGVYKPASMP FTPGMEAVGE VVAVGSGLTG RMIGDLVAYA GNPMGAYAEE QILPADKVVP VPSSIDPIVA
201: ASIMLKGMTA QFLLRRCFKV EPGHTILVHA AAGGVGSLLC QWANALGATV IGTVSTNEKA AQAKEDGCHH VIMYKNEDFV SRVNDITSGK GVNVVYDSVG
301: KDTFKGSLAC LKSRGYMVSF GQSSGSPDPI PLSDLAPKSL FLTRPSMMHY NETRDELLEC AGEVFANVTS GILKARVNHK YPLSRVADAH ADLENRITSG
401: SVVLLP

Arabidopsis Description

At5g61510 [Source:UniProtKB/TrEMBL;Acc:A1L4Y4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.