CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72063	Canola	plastid	96.7	83.81
Bra035926.1-P	Field mustard	cytosol	76.37	42.9
AT5G61510.1	Thale cress	plastid	88.46	39.66
PGSC0003DMT400055608	Potato	cytosol, peroxisome, plastid	64.84	36.09
Solyc06g034120.2.1	Tomato	extracellular	67.03	31.77
VIT_09s0002g08480.t01	Wine grape	cytosol	57.69	31.72
KRH27530	Soybean	nucleus	63.19	30.59
VIT_09s0002g08470.t01	Wine grape	cytosol	54.95	30.03
Os03t0101600-01	Rice	plasma membrane	54.4	28.7
HORVU4Hr1G088610.1	Barley	plastid	57.14	27.59
TraesCS5A01G542400.1	Wheat	plastid	57.14	27.51
TraesCS4D01G365600.1	Wheat	plastid	57.69	27.49
TraesCS4B01G371900.1	Wheat	mitochondrion, plastid	57.14	26.87
Zm00001d027276_P001	Maize	extracellular	54.4	26.61
KXG40429	Sorghum	plastid	53.85	25.52
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane, vacuole	32.97	20.91
CDX79076	Canola	cytosol, peroxisome, plastid	23.08	20.9
CDX82839	Canola	cytosol	23.63	13.23
CDY34537	Canola	cytosol	23.63	13.07
CDX80695	Canola	cytosol	23.63	13.07
CDY61544	Canola	plastid	24.18	11.43
CDY47631	Canola	plastid	23.63	11.17
CDY32016	Canola	peroxisome	19.23	10.06
CDX82448	Canola	mitochondrion	17.58	9.14
CDX75808	Canola	mitochondrion	17.03	8.86
CDX98523	Canola	plastid	20.88	6.0
CDX97630	Canola	plastid	20.88	6.0
CDX67648	Canola	extracellular	3.3	2.68
CDY16814	Canola	cytosol	0.55	1.11
CDX87218	Canola	cytosol	0.55	1.11

Protein Annotations

EnsemblPlants:CDY68244	EnsemblPlantsGene:GSBRNA2T00072090001	Gene3D:3.90.180.10	GO:A0A078JN78	GO:GO:0008150	GO:GO:0008152
GO:GO:0055114	InterPro:ADH_N	InterPro:GroES-like_sf	PANTHER:PTHR42975	PFAM:PF08240	ProteinID:CDY68244
ProteinID:CDY68244.1	SEG:seg	SUPFAM:SSF50129	UniParc:UPI0004EF2F41	UniProt:A0A078JN78	MapMan:35.2

Description

BnaAnng26580DBnaAnng26580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JN78]

Coordinates

chrLK037046:-:427..1478

Molecular Weight (calculated)

19732.4 Da

IEP (calculated)

9.042

GRAVY (calculated)

0.081

Length

182 amino acids

Sequence
(BLAST)

001: MAALLTLHHL SCLQASRHLF RLSTVTVKAL SPVAVEDPPE KKMVKGIRVY EHGGPEVLKW EDIEVGEPKD GEIRVKNKAI GLNFIDVYYR KGVYKPASMP
101: FTPGMEAVGE VVAVGSGLTG RKIGDLVAYA GSPMGAYAEE QILPADKVVP VPSSMDPIVA ASIMLKGMTA QFLLRRCFKV SH

Best Arabidopsis Sequence Match ( AT5G61510.1 )
(BLAST)

001: MAALTLHHHH HHRHHSCLQA SGHLSRRLYH RIFSSFPRNP VKDLNFRLSL ADFSSFSLST RGTVFAVRAL STVAVEESSE KKMVKGIRVY EHGGPEVLKW
101: EDVEVGEPKE GEIRVKNKAI GLNFIDVYFR KGVYKPASMP FTPGMEAVGE VVAVGSGLTG RMIGDLVAYA GNPMGAYAEE QILPADKVVP VPSSIDPIVA
201: ASIMLKGMTA QFLLRRCFKV EPGHTILVHA AAGGVGSLLC QWANALGATV IGTVSTNEKA AQAKEDGCHH VIMYKNEDFV SRVNDITSGK GVNVVYDSVG
301: KDTFKGSLAC LKSRGYMVSF GQSSGSPDPI PLSDLAPKSL FLTRPSMMHY NETRDELLEC AGEVFANVTS GILKARVNHK YPLSRVADAH ADLENRITSG
401: SVVLLP

Arabidopsis Description

At5g61510 [Source:UniProtKB/TrEMBL;Acc:A1L4Y4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.