Subcellular Localization
min:
: max
Winner_takes_all: cytosol, peroxisome, plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013540.1-P | Field mustard | cytosol | 90.05 | 55.69 |
| CDX82839 | Canola | cytosol | 89.05 | 55.08 |
| AT4G21580.1 | Thale cress | cytosol | 82.09 | 50.77 |
| VIT_14s0036g00560.t01 | Wine grape | cytosol | 38.81 | 49.06 |
| VIT_09s0002g07690.t01 | Wine grape | cytosol | 43.78 | 48.62 |
| KRH10765 | Soybean | cytosol, peroxisome, plastid | 72.14 | 44.62 |
| GSMUA_Achr4P15790_001 | Banana | cytosol | 70.15 | 43.38 |
| VIT_00s0301g00170.t01 | Wine grape | cytosol | 68.16 | 42.95 |
| PGSC0003DMT400057744 | Potato | cytosol | 69.15 | 42.77 |
| Solyc02g078940.2.1 | Tomato | extracellular | 68.16 | 42.15 |
| VIT_00s0301g00180.t01 | Wine grape | cytosol | 68.16 | 42.15 |
| VIT_09s0070g00550.t01 | Wine grape | cytosol | 32.84 | 42.04 |
| TraesCS6D01G358100.1 | Wheat | peroxisome | 66.17 | 40.67 |
| TraesCS6B01G411600.1 | Wheat | peroxisome | 65.17 | 40.06 |
| TraesCS6A01G373900.1 | Wheat | golgi | 65.17 | 40.06 |
| Os02t0805600-01 | Rice | plasma membrane | 64.18 | 39.33 |
| OQU85913 | Sorghum | cytosol | 63.68 | 39.02 |
| Zm00001d018418_P002 | Maize | cytosol | 64.68 | 38.24 |
| TraesCS6D01G358200.1 | Wheat | cytosol | 62.19 | 38.23 |
| TraesCS6B01G411700.1 | Wheat | cytosol | 62.19 | 38.23 |
| HORVU6Hr1G088160.7 | Barley | cytosol, mitochondrion, peroxisome | 63.68 | 36.68 |
| Zm00001d051987_P001 | Maize | cytosol | 54.23 | 35.62 |
| TraesCS6A01G374000.1 | Wheat | cytosol | 57.21 | 35.6 |
| VIT_09s0002g07620.t01 | Wine grape | cytosol | 52.24 | 35.59 |
| VIT_09s0002g07840.t01 | Wine grape | cytosol | 48.76 | 33.91 |
| VIT_09s0002g07580.t01 | Wine grape | peroxisome | 48.26 | 31.09 |
| CDY68244 | Canola | mitochondrion | 20.9 | 23.08 |
| CDY72063 | Canola | plastid | 21.39 | 20.48 |
| VIT_09s0002g07760.t01 | Wine grape | cytosol | 22.89 | 17.76 |
| CDY47631 | Canola | plastid | 32.34 | 16.88 |
| CDY61544 | Canola | plastid | 32.34 | 16.88 |
| CDY34537 | Canola | cytosol | 26.87 | 16.41 |
| CDX80695 | Canola | cytosol | 26.87 | 16.41 |
| CDY32016 | Canola | peroxisome | 25.37 | 14.66 |
| CDX75808 | Canola | mitochondrion | 23.88 | 13.71 |
| CDX82448 | Canola | mitochondrion | 22.89 | 13.14 |
| CDX97630 | Canola | plastid | 25.37 | 8.06 |
| CDX98523 | Canola | plastid | 25.37 | 8.06 |
| CDX67648 | Canola | extracellular | 8.46 | 7.59 |
| CDX87218 | Canola | cytosol | 0.0 | 0.0 |
| CDY16814 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.50.720 | Gene3D:3.90.180.10 | MapMan:35.2 | GO:A0A078CPG6 | InterPro:ADH_N | EnsemblPlants:CDX79076 |
| ProteinID:CDX79076 | ProteinID:CDX79076.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00131611001 | InterPro:GroES-like_sf | InterPro:NAD(P)-bd_dom_sf | PFAM:PF08240 |
| InterPro:PKS_ER | PANTHER:PTHR43006 | PANTHER:PTHR43006:SF7 | SMART:SM00829 | SUPFAM:SSF50129 | SUPFAM:SSF51735 |
| UniParc:UPI0004EE32FE | SEG:seg | : | : | : | : |
Description
BnaA01g11430D
Coordinates
chrLK031816:+:1637576..1638877
Molecular Weight (calculated)
21113.4 Da
IEP (calculated)
7.864
GRAVY (calculated)
0.035
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MKAIVISEPG APEVLQLREV EDPQVKDDEV LIRVHATALN RADTLQRLGS YSPPPGSSPY PGLECSGTIE SVGNSVSRWK VGDQVCALLS GGGYAEKVAV
101: PVGQVLPIPA GISLKDAAAF PEVACTVWST VFMMGRLSPA ESFLVHGGSS GIGTFAIQMA KHQGVRVFVT AGFGEASCLQ RARSGRLYKL QNRGLCGKGE
201: S
101: PVGQVLPIPA GISLKDAAAF PEVACTVWST VFMMGRLSPA ESFLVHGGSS GIGTFAIQMA KHQGVRVFVT AGFGEASCLQ RARSGRLYKL QNRGLCGKGE
201: S
001: MKAIVISEPG KPEVLQLRDV ADPEVKDDEV LIRVLATALN RADTLQRLGL YNPPPGSSPY LGLECSGTIE SVGKGVSRWK VGDQVCALLS GGGYAEKVSV
101: PAGQIFPIPA GISLKDAAAF PEVACTVWST VFMMGRLSVG ESFLIHGGSS GIGTFAIQIA KHLGVRVFVT AGSDEKLAAC KELGADVCIN YKTEDFVAKV
201: KAETDGKGVD VILDCIGAPY LQKNLDSLNF DGRLCIIGLM GGANAEIKLS SLLPKRLTVL GAALRPRSPE NKAVVVREVE KNVWPAIEAG KVKPVIYKYL
301: PLSQAAEGHS LMESSNHIGK ILLET
101: PAGQIFPIPA GISLKDAAAF PEVACTVWST VFMMGRLSVG ESFLIHGGSS GIGTFAIQIA KHLGVRVFVT AGSDEKLAAC KELGADVCIN YKTEDFVAKV
201: KAETDGKGVD VILDCIGAPY LQKNLDSLNF DGRLCIIGLM GGANAEIKLS SLLPKRLTVL GAALRPRSPE NKAVVVREVE KNVWPAIEAG KVKPVIYKYL
301: PLSQAAEGHS LMESSNHIGK ILLET
Arabidopsis Description
AT4g21580/F18E5_200 [Source:UniProtKB/TrEMBL;Acc:O65423]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.