Factsheet for VIT_14s0036g00560.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g07690.t01	Wine grape	cytosol	47.17	41.44
CDX79076	Canola	cytosol, peroxisome, plastid	49.06	38.81
VIT_00s0301g00180.t01	Wine grape	cytosol	65.41	32.0
VIT_00s0301g00170.t01	Wine grape	cytosol	64.15	31.97
VIT_09s0070g00550.t01	Wine grape	cytosol	29.56	29.94
VIT_09s0002g07580.t01	Wine grape	peroxisome	54.72	27.88
PGSC0003DMT400057744	Potato	cytosol	56.6	27.69
VIT_09s0002g07840.t01	Wine grape	cytosol	49.69	27.34
CDX82839	Canola	cytosol	55.35	27.08
AT4G21580.1	Thale cress	cytosol	55.35	27.08
Solyc02g078940.2.1	Tomato	extracellular	55.35	27.08
Bra013540.1-P	Field mustard	cytosol	54.72	26.77
KRH10765	Soybean	cytosol, peroxisome, plastid	54.72	26.77
VIT_09s0002g07620.t01	Wine grape	cytosol	49.06	26.44
GSMUA_Achr4P15790_001	Banana	cytosol	53.46	26.15
VIT_09s0002g07760.t01	Wine grape	cytosol	23.27	14.29
VIT_09s0002g08470.t01	Wine grape	cytosol	25.79	12.31
VIT_07s0151g00260.t01	Wine grape	cytosol	24.53	11.54
VIT_09s0002g08480.t01	Wine grape	cytosol	23.27	11.18
VIT_07s0151g00200.t01	Wine grape	cytosol, mitochondrion, plastid	15.72	10.08
VIT_07s0151g00090.t01	Wine grape	mitochondrion	23.9	9.92
VIT_09s0002g07820.t01	Wine grape	cytosol	6.29	8.7
VIT_01s0127g00740.t01	Wine grape	plastid	20.13	8.49
VIT_13s0067g00160.t01	Wine grape	peroxisome	18.24	8.41
VIT_19s0014g01890.t01	Wine grape	mitochondrion	18.87	8.31
VIT_15s0048g01710.t01	Wine grape	cytosol, peroxisome, plastid	16.98	8.21

Protein Annotations

ArrayExpress:VIT_14s0036g00560	EMBL:FN595241	EnsemblPlants:VIT_14s0036g00560.t01	EnsemblPlantsGene:VIT_14s0036g00560	Gene3D:3.40.50.720	Gene3D:3.90.180.10
GO:GO:0008150	GO:GO:0008152	GO:GO:0055114	InterPro:ADH_N	InterPro:GroES-like_sf	PANTHER:PTHR43006
PANTHER:PTHR43006:SF7	PFAM:PF08240	ProteinID:CCB47656	ProteinID:CCB47656.1	SUPFAM:SSF50129	UniParc:UPI0002108D05
UniProt:F6H617	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr14:-:10510782..10511424

Molecular Weight (calculated)

17160.8 Da

IEP (calculated)

9.344

GRAVY (calculated)

0.079

Length

159 amino acids

Sequence
(BLAST)

001: MESWMAITIL HRLESLTAAI NRVDTLQRKG LHPPSKAGSS YPGLECSGII EAVGKVVVQW KVGDQVCNFL SGGGYAEKVA TGQVLPVPSG VSLKDTAGIL
101: EVAHTVWSTV LMMSRLSAGE TFLIHRVPRF HCIPGHTVFF IAHSRGEPSS THLTSKRNT

Best Arabidopsis Sequence Match ( AT4G21580.1 )
(BLAST)

001: MKAIVISEPG KPEVLQLRDV ADPEVKDDEV LIRVLATALN RADTLQRLGL YNPPPGSSPY LGLECSGTIE SVGKGVSRWK VGDQVCALLS GGGYAEKVSV
101: PAGQIFPIPA GISLKDAAAF PEVACTVWST VFMMGRLSVG ESFLIHGGSS GIGTFAIQIA KHLGVRVFVT AGSDEKLAAC KELGADVCIN YKTEDFVAKV
201: KAETDGKGVD VILDCIGAPY LQKNLDSLNF DGRLCIIGLM GGANAEIKLS SLLPKRLTVL GAALRPRSPE NKAVVVREVE KNVWPAIEAG KVKPVIYKYL
301: PLSQAAEGHS LMESSNHIGK ILLET

Arabidopsis Description

AT4g21580/F18E5_200 [Source:UniProtKB/TrEMBL;Acc:O65423]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.