Factsheet for VIT_00s0301g00180.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0301g00170.t01	Wine grape	cytosol	90.46	92.16
GSMUA_Achr4P15790_001	Banana	cytosol	77.85	77.85
PGSC0003DMT400057744	Potato	cytosol	77.54	77.54
Solyc02g078940.2.1	Tomato	extracellular	76.62	76.62
VIT_09s0002g07820.t01	Wine grape	cytosol	27.08	76.52
KRH10765	Soybean	cytosol, peroxisome, plastid	75.38	75.38
CDX82839	Canola	cytosol	73.85	73.85
Bra013540.1-P	Field mustard	cytosol	73.23	73.23
AT4G21580.1	Thale cress	cytosol	72.62	72.62
CDX79076	Canola	cytosol, peroxisome, plastid	42.15	68.16
VIT_09s0002g07690.t01	Wine grape	cytosol	37.54	67.4
VIT_14s0036g00560.t01	Wine grape	cytosol	32.0	65.41
VIT_09s0002g07840.t01	Wine grape	cytosol	57.85	65.05
VIT_09s0002g07620.t01	Wine grape	cytosol	54.46	60.0
VIT_09s0002g07580.t01	Wine grape	peroxisome	57.54	59.94
VIT_09s0002g07760.t01	Wine grape	cytosol	41.85	52.51
VIT_09s0070g00550.t01	Wine grape	cytosol	24.0	49.68
VIT_09s0002g08470.t01	Wine grape	cytosol	31.08	30.33
VIT_09s0002g08480.t01	Wine grape	cytosol	30.46	29.91
VIT_07s0151g00260.t01	Wine grape	cytosol	27.69	26.63
VIT_07s0151g00200.t01	Wine grape	cytosol, mitochondrion, plastid	20.31	26.61
VIT_01s0127g00740.t01	Wine grape	plastid	28.62	24.67
VIT_07s0151g00090.t01	Wine grape	mitochondrion	28.31	24.02
VIT_13s0067g00160.t01	Wine grape	peroxisome	25.23	23.77
VIT_19s0014g01890.t01	Wine grape	mitochondrion	25.54	22.99
VIT_15s0048g01710.t01	Wine grape	cytosol, peroxisome, plastid	23.08	22.8

Protein Annotations

EntrezGene:100262495	wikigene:100262495	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C
InterPro:ADH_N	EMBL:AM454331	ProteinID:CAN61224	ProteinID:CAN61224.1	ProteinID:CCB45170	ProteinID:CCB45170.1
UniProt:F6GYY4	EMBL:FN594977	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	EntrezGene:LOC100262495	wikigene:LOC100262495	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	PANTHER:PTHR43006	PANTHER:PTHR43006:SF7	InterPro:Quinone_OxRdtase_PIG3
SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	TIGR:TC53199	TIGRFAMs:TIGR02824	UniParc:UPI000210A916
ArrayExpress:VIT_00s0301g00180	EnsemblPlantsGene:VIT_00s0301g00180	EnsemblPlants:VIT_00s0301g00180.t01	RefSeq:XP_002267927	RefSeq:XP_002267927.2	RefSeq:XP_003632765
RefSeq:XP_003632765.1	RefSeq:XP_003632827	RefSeq:XP_003632827.1	RefSeq:XP_003632831	RefSeq:XP_003632831.1	:

Description

No Description!

Coordinates

chrUn:+:22231544..22234639

Molecular Weight (calculated)

34270.7 Da

IEP (calculated)

6.051

GRAVY (calculated)

0.206

Length

325 amino acids

Sequence
(BLAST)

001: MKAVVITTPG DPQVLQVQEV ENPEIGDDEV LIRVEAAAIN QADTLQRKGL HPPPKGGSPY PGLECSGIIE AVGKAVVRWK VGDQVCALLS GGGYAEKVAA
101: PAGLVLPVPS GVSLKDAAGI PEVACTVWSS VFMMSQLSAG ETFLVHGGSS GIGIFAIQIA KHIGARVFVT AGNEEKLAVC KDLGADVCIN YKTEDFVARV
201: KEETGGKGVD VILDNIGGAY FQRNIDSLNV DGRLFIIGFQ GGTVAEVNLS GLLARRLTVQ AAGLRNRSLE NKAVIVSEVE KNVWPAIMAG KVKTVVYKYF
301: PLTDAAEAHL LMESGKHFGK ILLIP

Best Arabidopsis Sequence Match ( AT4G21580.1 )
(BLAST)

001: MKAIVISEPG KPEVLQLRDV ADPEVKDDEV LIRVLATALN RADTLQRLGL YNPPPGSSPY LGLECSGTIE SVGKGVSRWK VGDQVCALLS GGGYAEKVSV
101: PAGQIFPIPA GISLKDAAAF PEVACTVWST VFMMGRLSVG ESFLIHGGSS GIGTFAIQIA KHLGVRVFVT AGSDEKLAAC KELGADVCIN YKTEDFVAKV
201: KAETDGKGVD VILDCIGAPY LQKNLDSLNF DGRLCIIGLM GGANAEIKLS SLLPKRLTVL GAALRPRSPE NKAVVVREVE KNVWPAIEAG KVKPVIYKYL
301: PLSQAAEGHS LMESSNHIGK ILLET

Arabidopsis Description

AT4g21580/F18E5_200 [Source:UniProtKB/TrEMBL;Acc:O65423]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.