Factsheet for TraesCS6A01G374000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G411700.1	Wheat	cytosol	88.85	87.77
TraesCS6D01G358200.1	Wheat	cytosol	88.24	87.16
HORVU6Hr1G088160.7	Barley	cytosol, mitochondrion, peroxisome	88.54	81.95
TraesCS6A01G373900.1	Wheat	golgi	81.73	80.73
Os02t0805600-01	Rice	plasma membrane	79.88	78.66
OQU85913	Sorghum	cytosol	77.71	76.52
Zm00001d018418_P002	Maize	cytosol	77.4	73.53
Zm00001d051987_P001	Maize	cytosol	69.04	72.88
GSMUA_Achr4P15790_001	Banana	cytosol	69.35	68.92
PGSC0003DMT400057744	Potato	cytosol	69.04	68.62
Solyc02g078940.2.1	Tomato	extracellular	69.04	68.62
KRH10765	Soybean	cytosol, peroxisome, plastid	66.56	66.15
CDX82839	Canola	cytosol	63.78	63.38
Bra013540.1-P	Field mustard	cytosol	63.16	62.77
AT4G21580.1	Thale cress	cytosol	63.16	62.77
VIT_09s0002g07820.t01	Wine grape	cytosol	21.36	60.0
CDX79076	Canola	cytosol, peroxisome, plastid	35.6	57.21
TraesCS2A01G277700.1	Wheat	plastid	21.36	30.53
TraesCS5A01G542400.1	Wheat	plastid	31.89	27.25
TraesCS2A01G277900.1	Wheat	golgi	26.93	25.97
TraesCS5A01G280700.1	Wheat	plastid	27.55	25.95
TraesCS5A01G280800.1	Wheat	cytosol, peroxisome, plastid	26.63	25.6
TraesCS7A01G142200.1	Wheat	cytosol, peroxisome, plastid	21.98	24.65
TraesCS5A01G014100.1	Wheat	plastid	25.39	24.4
TraesCS6A01G246800.1	Wheat	peroxisome	24.15	22.54
TraesCS6A01G133100.1	Wheat	plastid	25.7	21.67
TraesCS3A01G292000.1	Wheat	mitochondrion	21.98	19.56

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00107	InterPro:PKS_ER	PANTHER:PTHR43006	PANTHER:PTHR43006:SF7	InterPro:Quinone_OxRdtase_PIG3	SMART:SM00829
SUPFAM:SSF50129	SUPFAM:SSF51735	TIGRFAMs:TIGR02824	EnsemblPlantsGene:TraesCS6A01G374000	EnsemblPlants:TraesCS6A01G374000.1	TIGR:cd05276

Description

No Description!

Coordinates

chr6A:+:596897693..596899545

Molecular Weight (calculated)

33653.4 Da

IEP (calculated)

5.042

GRAVY (calculated)

0.132

Length

323 amino acids

Sequence
(BLAST)

001: MRHEQPTRGR AEQAVRATGE IASPGGPEVL EESEVEDLPA PGDGEVLLRV AAAGVNRPGV ECSGSILALG ANVHPRWAVG DQVCALLNGG GYAEKVVVPA
101: GQLLPVPEGV SLTDAAGLPE VACTVWSTVF MSSHLSPGES FLIHGGSSGI GTFAIQMAKH LGIKVFVTAG SQEKLDACAG LGADVCINYK TEDFAACIKE
201: ETNGNGGDVI LDNVGGSYLQ RNLDSLAVDG RLFIIGFMGG SVTEVNLQAM LARRLTIQVA GLRSRSLANK AQIVSEVERN VWPAVASGNV KPVVYRTLPL
301: SEAAEAHKLM ESSSHIGKIL LIP

Best Arabidopsis Sequence Match ( AT4G21580.1 )
(BLAST)

001: MKAIVISEPG KPEVLQLRDV ADPEVKDDEV LIRVLATALN RADTLQRLGL YNPPPGSSPY LGLECSGTIE SVGKGVSRWK VGDQVCALLS GGGYAEKVSV
101: PAGQIFPIPA GISLKDAAAF PEVACTVWST VFMMGRLSVG ESFLIHGGSS GIGTFAIQIA KHLGVRVFVT AGSDEKLAAC KELGADVCIN YKTEDFVAKV
201: KAETDGKGVD VILDCIGAPY LQKNLDSLNF DGRLCIIGLM GGANAEIKLS SLLPKRLTVL GAALRPRSPE NKAVVVREVE KNVWPAIEAG KVKPVIYKYL
301: PLSQAAEGHS LMESSNHIGK ILLET

Arabidopsis Description

AT4g21580/F18E5_200 [Source:UniProtKB/TrEMBL;Acc:O65423]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.