Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- peroxisome 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G143400.1 | Wheat | cytosol | 83.04 | 89.71 |
| TraesCS7B01G043400.1 | Wheat | cytosol, peroxisome, plastid | 88.99 | 88.99 |
| TraesCS2A01G277900.1 | Wheat | golgi | 85.71 | 85.97 |
| TraesCS7A01G142200.1 | Wheat | cytosol, peroxisome, plastid | 72.92 | 85.07 |
| HORVU2Hr1G042270.1 | Barley | cytosol, plastid | 35.71 | 80.0 |
| EES10573 | Sorghum | plastid | 72.92 | 71.22 |
| OQU83589 | Sorghum | cytosol | 66.67 | 70.66 |
| Zm00001d025166_P001 | Maize | plastid | 74.11 | 67.48 |
| Os04t0372700-01 | Rice | plasma membrane | 25.6 | 66.67 |
| PGSC0003DMT400062565 | Potato | cytosol, peroxisome, plastid | 62.8 | 64.13 |
| Solyc09g059030.2.1 | Tomato | plastid | 62.2 | 63.53 |
| Solyc09g059020.2.1 | Tomato | cytosol, extracellular, peroxisome | 51.49 | 63.14 |
| VIT_07s0151g00200.t01 | Wine grape | cytosol, mitochondrion, plastid | 46.13 | 62.5 |
| AT4G13010.1 | Thale cress | cytosol | 59.23 | 60.49 |
| Bra001207.1-P | Field mustard | cytosol | 58.93 | 60.18 |
| CDX80695 | Canola | cytosol | 58.93 | 60.18 |
| CDY34537 | Canola | cytosol | 58.93 | 60.18 |
| Solyc09g059040.2.1 | Tomato | plastid | 58.63 | 59.88 |
| PGSC0003DMT400044064 | Potato | cytosol | 58.33 | 59.57 |
| KRH23756 | Soybean | endoplasmic reticulum | 58.04 | 59.45 |
| VIT_07s0151g00260.t01 | Wine grape | cytosol | 59.52 | 59.17 |
| PGSC0003DMT400022514 | Potato | cytosol | 56.85 | 57.88 |
| GSMUA_Achr11P... | Banana | plasma membrane | 56.25 | 57.27 |
| PGSC0003DMT400044065 | Potato | cytosol | 56.25 | 56.93 |
| TraesCS5A01G280800.1 | Wheat | cytosol, peroxisome, plastid | 56.85 | 56.85 |
| KRH44933 | Soybean | cytosol, peroxisome | 50.3 | 56.71 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plastid | 44.64 | 56.6 |
| KRG99627 | Soybean | cytosol | 55.06 | 56.23 |
| KRH46629 | Soybean | cytosol | 55.06 | 56.23 |
| TraesCS2A01G277700.1 | Wheat | plastid | 36.9 | 54.87 |
| VIT_07s0151g00090.t01 | Wine grape | mitochondrion | 61.01 | 53.52 |
| TraesCS5A01G280700.1 | Wheat | plastid | 52.08 | 51.02 |
| PGSC0003DMT400090732 | Potato | plastid | 20.24 | 30.91 |
| TraesCS6A01G373900.1 | Wheat | golgi | 26.49 | 27.22 |
| TraesCS6A01G374000.1 | Wheat | cytosol | 24.4 | 25.39 |
| TraesCS6A01G133100.1 | Wheat | plastid | 28.87 | 25.33 |
| TraesCS3A01G292000.1 | Wheat | mitochondrion | 25.0 | 23.14 |
| TraesCS6A01G246800.1 | Wheat | peroxisome | 22.62 | 21.97 |
| TraesCS5A01G542400.1 | Wheat | plastid | 21.13 | 18.78 |
Protein Annotations
| Gene3D:3.40.50.720 | Gene3D:3.90.180.10 | MapMan:35.1 | InterPro:ADH_N | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:GroES-like_sf | InterPro:NAD(P)-bd_dom_sf |
| PFAM:PF08240 | PFAM:PF13602 | InterPro:PKS_ER | PANTHER:PTHR44013 | PANTHER:PTHR44013:SF3 | SMART:SM00829 |
| SUPFAM:SSF50129 | SUPFAM:SSF51735 | EnsemblPlantsGene:TraesCS5A01G014100 | EnsemblPlants:TraesCS5A01G014100.1 | TIGR:cd08267 | SEG:seg |
Description
No Description!
Coordinates
chr5A:-:9589964..9596577
Molecular Weight (calculated)
35354.0 Da
IEP (calculated)
9.686
GRAVY (calculated)
0.107
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTPTATPAK MRAVLYDACG GGTAGLKHAQ VLVPSAKRNE VLLKLQAATV NPLDWKIQKG DLRPLLPRRL PFIPVPDVAG VVVDVGPGVN GLTAGDQVVA
101: KLNSLNGGGL VEYTVASANL TVKRPAKVSA AEGAGLPIAA GTVLQALRSI GSKFDGTGKP LNVLITAASG GVGLYAVQLA KLANLHVNAT CDDRNIDLVK
201: SLGANEVMDY RTPEGATLQS PSGRKYDDVV HCTVAVNWSS FQPLLSDGGR VVDITPNLSA ILTYVLHRVT FSKKRLVPQL LLSLNKVDLE FLAGLLEEDK
301: LKTVIDSRFP LSDAGKAWQS SIDGHATGKI VVEMKS
101: KLNSLNGGGL VEYTVASANL TVKRPAKVSA AEGAGLPIAA GTVLQALRSI GSKFDGTGKP LNVLITAASG GVGLYAVQLA KLANLHVNAT CDDRNIDLVK
201: SLGANEVMDY RTPEGATLQS PSGRKYDDVV HCTVAVNWSS FQPLLSDGGR VVDITPNLSA ILTYVLHRVT FSKKRLVPQL LLSLNKVDLE FLAGLLEEDK
301: LKTVIDSRFP LSDAGKAWQS SIDGHATGKI VVEMKS
001: MAGKLMHALQ YNSYGGGAAG LEHVQVPVPT PKSNEVCLKL EATSLNPVDW KIQKGMIRPF LPRKFPCIPA TDVAGEVVEV GSGVKNFKAG DKVVAVLSHL
101: GGGGLAEFAV ATEKLTVKRP QEVGAAEAAA LPVAGLTALQ ALTNPAGLKL DGTGKKANIL VTAASGGVGH YAVQLAKLAN AHVTATCGAR NIEFVKSLGA
201: DEVLDYKTPE GAALKSPSGK KYDAVVHCAN GIPFSVFEPN LSENGKVIDI TPGPNAMWTY AVKKITMSKK QLVPLLLIPK AENLEFMVNL VKEGKVKTVI
301: DSKHPLSKAE DAWAKSIDGH ATGKIIVEP
101: GGGGLAEFAV ATEKLTVKRP QEVGAAEAAA LPVAGLTALQ ALTNPAGLKL DGTGKKANIL VTAASGGVGH YAVQLAKLAN AHVTATCGAR NIEFVKSLGA
201: DEVLDYKTPE GAALKSPSGK KYDAVVHCAN GIPFSVFEPN LSENGKVIDI TPGPNAMWTY AVKKITMSKK QLVPLLLIPK AENLEFMVNL VKEGKVKTVI
301: DSKHPLSKAE DAWAKSIDGH ATGKIIVEP
Arabidopsis Description
CEQORHChloroplast envelope quinone oxidoreductase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9SV68]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.