Factsheet for TraesCS2A01G277900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 2
peroxisome 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	peroxisome, plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

golgi: 23128297
golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G295300.1	Wheat	golgi	97.31	97.31
TraesCS2D01G276900.1	Wheat	plastid	96.72	96.72
HORVU2Hr1G042270.1	Barley	cytosol, plastid	39.4	88.0
TraesCS5A01G014100.1	Wheat	plastid	85.97	85.71
TraesCS7A01G142200.1	Wheat	cytosol, peroxisome, plastid	73.43	85.42
EES10573	Sorghum	plastid	81.19	79.07
OQU83589	Sorghum	cytosol	72.84	76.97
Zm00001d025166_P001	Maize	plastid	82.69	75.07
Os04t0372700-01	Rice	plasma membrane	28.66	74.42
PGSC0003DMT400062565	Potato	cytosol, peroxisome, plastid	70.45	71.73
Solyc09g059030.2.1	Tomato	plastid	69.55	70.82
Solyc09g059020.2.1	Tomato	cytosol, extracellular, peroxisome	55.52	67.88
VIT_07s0151g00200.t01	Wine grape	cytosol, mitochondrion, plastid	50.15	67.74
PGSC0003DMT400044064	Potato	cytosol	65.97	67.17
Solyc09g059040.2.1	Tomato	plastid	65.67	66.87
CDX80695	Canola	cytosol	64.78	65.96
CDY34537	Canola	cytosol	64.78	65.96
AT4G13010.1	Thale cress	cytosol	64.78	65.96
Bra001207.1-P	Field mustard	cytosol	64.78	65.96
KRH23756	Soybean	endoplasmic reticulum	62.99	64.33
GSMUA_Achr11P...	Banana	plasma membrane	62.39	63.33
KRG99627	Soybean	cytosol	61.79	62.92
TraesCS5A01G280800.1	Wheat	cytosol, peroxisome, plastid	62.99	62.8
PGSC0003DMT400022514	Potato	cytosol	61.79	62.73
VIT_07s0151g00260.t01	Wine grape	cytosol	63.28	62.72
KRH46629	Soybean	cytosol	61.49	62.61
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	48.96	61.89
PGSC0003DMT400044065	Potato	cytosol	61.19	61.75
TraesCS2A01G277700.1	Wheat	plastid	40.6	60.18
KRH44933	Soybean	cytosol, peroxisome	53.43	60.07
VIT_07s0151g00090.t01	Wine grape	mitochondrion	67.76	59.27
TraesCS5A01G280700.1	Wheat	plastid	56.12	54.81
PGSC0003DMT400090732	Potato	plastid	23.28	35.45
TraesCS6A01G373900.1	Wheat	golgi	27.46	28.13
TraesCS6A01G374000.1	Wheat	cytosol	25.97	26.93
TraesCS6A01G133100.1	Wheat	plastid	30.45	26.63
TraesCS3A01G292000.1	Wheat	mitochondrion	28.06	25.9
TraesCS6A01G246800.1	Wheat	peroxisome	24.78	23.99
TraesCS5A01G542400.1	Wheat	plastid	22.39	19.84

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf
PFAM:PF08240	PFAM:PF13602	InterPro:PKS_ER	PANTHER:PTHR44013	PANTHER:PTHR44013:SF3	SMART:SM00829
SUPFAM:SSF50129	SUPFAM:SSF51735	EnsemblPlantsGene:TraesCS2A01G277900	EnsemblPlants:TraesCS2A01G277900.1	TIGR:cd08267	SEG:seg

Description

No Description!

Coordinates

chr2A:+:460899731..460902086

Molecular Weight (calculated)

34811.3 Da

IEP (calculated)

9.353

GRAVY (calculated)

0.141

Length

335 amino acids

Sequence
(BLAST)

001: MATPTTTPAT MRAVQYDACG GGAAGLKHVE VPVPSAKKNE VLLKLQAATI NPVDWKIQKG DLRPLLPRRL PFIPVTDVAG VVVDVGPGVK GLTAGDQVVA
101: MLNSFNGGGL AEYAVASANL TVKRPAEVSA AEGAGLPIAA GTALQALRSI GAKFDGTGKP LNVLVTAASG GVGLYAVQLA KLANLHVTAT CGARNMDLVK
201: SLGADEVMDY RTPEGASLQS PSGRKYDGVV HCTVGVSWSS FQPLLSDAGR VIDITPNFSA ILTSALHRMT FSKKRLVPLL LSPNKADLEL LVGLLKEGKL
301: KTVVDSKFPL SEADKAWQSS IDGHATGKIV VEMES

Best Arabidopsis Sequence Match ( AT4G13010.1 )
(BLAST)

001: MAGKLMHALQ YNSYGGGAAG LEHVQVPVPT PKSNEVCLKL EATSLNPVDW KIQKGMIRPF LPRKFPCIPA TDVAGEVVEV GSGVKNFKAG DKVVAVLSHL
101: GGGGLAEFAV ATEKLTVKRP QEVGAAEAAA LPVAGLTALQ ALTNPAGLKL DGTGKKANIL VTAASGGVGH YAVQLAKLAN AHVTATCGAR NIEFVKSLGA
201: DEVLDYKTPE GAALKSPSGK KYDAVVHCAN GIPFSVFEPN LSENGKVIDI TPGPNAMWTY AVKKITMSKK QLVPLLLIPK AENLEFMVNL VKEGKVKTVI
301: DSKHPLSKAE DAWAKSIDGH ATGKIIVEP

Arabidopsis Description

CEQORHChloroplast envelope quinone oxidoreductase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9SV68]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.