Factsheet for Zm00001d042260_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 2
peroxisome 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006069_P001	Maize	peroxisome	93.82	93.82
EER97004	Sorghum	cytosol, peroxisome, plastid	79.03	86.22
Os09t0502500-01	Rice	plasma membrane	65.86	72.06
TraesCS5B01G279700.1	Wheat	plastid	64.78	70.67
TraesCS5A01G280700.1	Wheat	plastid	63.71	69.1
HORVU5Hr1G075540.2	Barley	peroxisome, plastid	62.9	67.83
Zm00001d021025_P001	Maize	mitochondrion, peroxisome, plastid	61.56	66.19
HORVU5Hr1G034160.1	Barley	cytosol, plastid	36.29	66.18
TraesCS5D01G287300.2	Wheat	plastid	63.98	64.67
Solyc09g059030.2.1	Tomato	plastid	53.76	60.79
PGSC0003DMT400062565	Potato	cytosol, peroxisome, plastid	53.76	60.79
KRG99627	Soybean	cytosol	52.15	58.97
PGSC0003DMT400044064	Potato	cytosol	52.15	58.97
Solyc09g059040.2.1	Tomato	plastid	51.08	57.75
PGSC0003DMT400022514	Potato	cytosol	51.08	57.58
AT4G13010.1	Thale cress	cytosol	50.81	57.45
Bra001207.1-P	Field mustard	cytosol	50.81	57.45
CDY34537	Canola	cytosol	50.81	57.45
CDX80695	Canola	cytosol	50.81	57.45
VIT_07s0151g00200.t01	Wine grape	cytosol, mitochondrion, plastid	38.17	57.26
KRH23756	Soybean	endoplasmic reticulum	50.27	57.01
PGSC0003DMT400044065	Potato	cytosol	50.81	56.93
KRH46629	Soybean	cytosol	50.27	56.84
Solyc09g059020.2.1	Tomato	cytosol, extracellular, peroxisome	41.13	55.84
VIT_07s0151g00260.t01	Wine grape	cytosol	48.92	53.85
KRH44933	Soybean	cytosol, peroxisome	42.2	52.68
Zm00001d025166_P001	Maize	plastid	52.15	52.57
VIT_07s0151g00090.t01	Wine grape	mitochondrion	51.88	50.39
PGSC0003DMT400090732	Potato	plastid	19.35	32.73
Zm00001d043432_P001	Maize	mitochondrion	26.88	27.55
Zm00001d018418_P002	Maize	cytosol	23.12	25.29
Zm00001d032332_P001	Maize	plastid	25.81	24.87
Zm00001d051987_P001	Maize	cytosol	20.43	24.84
Zm00001d002246_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	19.89	21.14
Zm00001d027276_P001	Maize	extracellular	20.43	20.43

Protein Annotations

EntrezGene:100283038	Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	UniProt:A0A1D6N2E1	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf
InterPro:NAD(P)-bd_dom_sf	ProteinID:ONM34883.1	PFAM:PF13602	InterPro:PKS_ER	PANTHER:PTHR44013	PANTHER:PTHR44013:SF2
SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000844F9B5	EnsemblPlantsGene:Zm00001d042260	EnsemblPlants:Zm00001d042260_P002
EnsemblPlants:Zm00001d042260_T002	SEG:seg	:	:	:	:

Description

Chloroplastic quinone-oxidoreductase

Coordinates

chr3:-:157879476..157881240

Molecular Weight (calculated)

39255.8 Da

IEP (calculated)

10.787

GRAVY (calculated)

0.097

Length

372 amino acids

Sequence
(BLAST)

001: MAAPSGTMRA VQYDRYGGGA RGLKHVEVPI PSPKKGEVLI RMEATSINVV DWKFQNGFAR PFMPRRFPFI SGTVTARRAE PWLRVRTGDL HRRVIVFAFW
101: RTGFDLAGEV VELGAGVSSF KPGDKVIAIN FPNGGGLAEY AVASASRTAA RPPEVSAVEG VCVPIAAVTA LGSLRTAGVT VTLDDPARAP ATPKNVLVTA
201: ASGAVGHFAV QLARMGGHNV TATCGARNLG LVRSLGADEA LDYKTPEGAK LRSPSGRKYD AVVHCAAKGL PWSVFRPVLA ASGTVVDITP GFVAVVTAIL
301: QVATFSKKRL VPLIVTPKKE EMELLLGMLK QGRLKTVIDS RHPLGSAHEG WAKSMSGHAT GKVVIEIGAA QP

Best Arabidopsis Sequence Match ( AT4G13010.1 )
(BLAST)

001: MAGKLMHALQ YNSYGGGAAG LEHVQVPVPT PKSNEVCLKL EATSLNPVDW KIQKGMIRPF LPRKFPCIPA TDVAGEVVEV GSGVKNFKAG DKVVAVLSHL
101: GGGGLAEFAV ATEKLTVKRP QEVGAAEAAA LPVAGLTALQ ALTNPAGLKL DGTGKKANIL VTAASGGVGH YAVQLAKLAN AHVTATCGAR NIEFVKSLGA
201: DEVLDYKTPE GAALKSPSGK KYDAVVHCAN GIPFSVFEPN LSENGKVIDI TPGPNAMWTY AVKKITMSKK QLVPLLLIPK AENLEFMVNL VKEGKVKTVI
301: DSKHPLSKAE DAWAKSIDGH ATGKIIVEP

Arabidopsis Description

CEQORHChloroplast envelope quinone oxidoreductase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9SV68]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.