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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 4
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:mitochondrion
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G279700.1 Wheat plastid 70.88 70.67
TraesCS5A01G280700.1 Wheat plastid 70.88 70.26
HORVU5Hr1G075540.2 Barley peroxisome, plastid 69.71 68.7
EER97004 Sorghum cytosol, peroxisome, plastid 68.82 68.62
Os09t0503000-01 Rice cytosol, mitochondrion, plastid 32.94 68.29
HORVU5Hr1G034160.1 Barley cytosol, plastid 40.88 68.14
Zm00001d042260_P002 Maize mitochondrion 72.06 65.86
Zm00001d006069_P001 Maize peroxisome 71.76 65.59
TraesCS5D01G287300.2 Wheat plastid 70.88 65.49
Os09t0503100-01 Rice plasma membrane 65.88 64.74
Solyc09g059030.2.1 Tomato plastid 60.88 62.92
PGSC0003DMT400062565 Potato cytosol, peroxisome, plastid 60.59 62.61
PGSC0003DMT400044064 Potato cytosol 59.71 61.7
Solyc09g059040.2.1 Tomato plastid 58.82 60.79
AT4G13010.1 Thale cress cytosol 57.94 59.88
KRH23756 Soybean endoplasmic reticulum 57.06 59.15
KRG99627 Soybean cytosol 56.76 58.66
PGSC0003DMT400022514 Potato cytosol 56.76 58.48
VIT_07s0151g00200.t01 Wine grape cytosol, mitochondrion, plastid 42.65 58.47
Bra001207.1-P Field mustard cytosol 56.18 58.05
CDX80695 Canola cytosol 56.18 58.05
CDY34537 Canola cytosol 56.18 58.05
Solyc09g059020.2.1 Tomato cytosol, extracellular, peroxisome 46.47 57.66
PGSC0003DMT400044065 Potato cytosol 56.18 57.53
KRH46629 Soybean cytosol 55.29 57.14
VIT_07s0151g00260.t01 Wine grape cytosol 56.76 57.1
KRH44933 Soybean cytosol, peroxisome 48.53 55.37
Os04t0359100-01 Rice plasma membrane 51.76 53.01
VIT_07s0151g00090.t01 Wine grape mitochondrion 58.82 52.22
Os04t0358000-01 Rice endoplasmic reticulum 47.94 51.42
Os04t0372700-01 Rice plasma membrane 19.41 51.16
Os04t0359700-00 Rice cytosol, mitochondrion, peroxisome, plastid 48.82 45.98
PGSC0003DMT400090732 Potato plastid 21.18 32.73
Os01t0753100-01 Rice mitochondrion 28.82 26.85
Os02t0805600-01 Rice plasma membrane 25.88 26.83
Os08t0379400-02 Rice plastid 27.35 23.85
Os10t0561100-01 Rice cytosol 22.94 23.57
Os03t0101600-01 Rice plasma membrane 23.53 23.19
Os05t0313500-01 Rice peroxisome, plastid 20.29 20.6
Protein Annotations
Gene3D:3.40.50.720Gene3D:3.90.180.10MapMan:35.1EntrezGene:4347491InterPro:ADH_NEMBL:AK109664
ProteinID:BAF25501.2ProteinID:BAT08826.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152
GO:GO:0016491GO:GO:0055114InterPro:GroES-like_sfInterPro:NAD(P)-bd_dom_sfEnsemblPlantsGene:Os09g0502500EnsemblPlants:Os09t0502500-01
PFAM:PF08240PFAM:PF13602InterPro:PKS_ERPANTHER:PTHR44013PANTHER:PTHR44013:SF2UniProt:Q0J0P9
SMART:SM00829SUPFAM:SSF50129SUPFAM:SSF51735UniParc:UPI000188AED3RefSeq:XP_015612598.1SEG:seg
Description
Alcohol dehydrogenase superfamily, zinc-containing protein. (Os09t0502500-01)
Coordinates
chr9:+:19443222..19444839
Molecular Weight (calculated)
34990.3 Da
IEP (calculated)
10.010
GRAVY (calculated)
0.129
Length
340 amino acids
Sequence
(BLAST)
001: MATSSRRMRA VQYDKYGGGA QALKHVEVPI PTPKKGEVLI KMEAGSINQV DWKFQKGVAR PFMPNKFPFI PVYDLAGEVV ELGRGVSSFK VGDKVIAINF
101: PGGGGLAEYA VAQASRTAPR PPEVSAAVGA CLPIAAVTAL VALRTAGVSL DAGDGGGGGA KKNVLVTAAS GGVGHFAVQL ASAAGHRVTA TCGARNAGLV
201: GGLGADKVLD YATPEGAALR SPSGRRYDAV VHCAAVAGLP WSAFAPVLAD AGVVVDLTPG AAAFATALRQ RVTFSRKRLV PLFVSPTKED MELVAGMVAE
301: GKLRAVIESR HPLSRAEEGW ARSMAGHATG KIIVEMGDEQ
Best Arabidopsis Sequence Match ( AT4G13010.1 )
(BLAST)
001: MAGKLMHALQ YNSYGGGAAG LEHVQVPVPT PKSNEVCLKL EATSLNPVDW KIQKGMIRPF LPRKFPCIPA TDVAGEVVEV GSGVKNFKAG DKVVAVLSHL
101: GGGGLAEFAV ATEKLTVKRP QEVGAAEAAA LPVAGLTALQ ALTNPAGLKL DGTGKKANIL VTAASGGVGH YAVQLAKLAN AHVTATCGAR NIEFVKSLGA
201: DEVLDYKTPE GAALKSPSGK KYDAVVHCAN GIPFSVFEPN LSENGKVIDI TPGPNAMWTY AVKKITMSKK QLVPLLLIPK AENLEFMVNL VKEGKVKTVI
301: DSKHPLSKAE DAWAKSIDGH ATGKIIVEP
Arabidopsis Description
CEQORHChloroplast envelope quinone oxidoreductase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9SV68]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.