Factsheet for TraesCS6D01G122800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 22160430

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G025630.2	Barley	cytosol	66.32	97.32
TraesCS6B01G161600.1	Wheat	plastid	97.13	97.13
TraesCS6A01G133100.1	Wheat	plastid	96.34	96.34
HORVU6Hr1G025730.2	Barley	plastid	96.08	87.0
GSMUA_Achr4P07780_001	Banana	cytosol	66.06	81.88
Os08t0379400-02	Rice	plastid	80.68	79.23
Zm00001d032332_P001	Maize	plastid	74.93	74.35
VIT_01s0127g00740.t01	Wine grape	plastid	70.76	71.88
KXG25078	Sorghum	plastid	74.93	71.75
KRH56616	Soybean	cytosol	19.06	68.22
Solyc05g005480.2.1	Tomato	plastid	68.93	68.04
AT1G23740.1	Thale cress	plastid	67.36	66.84
Bra024616.1-P	Field mustard	plastid	67.1	66.75
PGSC0003DMT400079606	Potato	cytosol	67.36	66.49
CDY47631	Canola	plastid	66.84	66.49
CDY61544	Canola	plastid	66.84	66.49
KRH07194	Soybean	nucleus	55.35	66.46
KRG99340	Soybean	plastid	68.15	66.08
KRH45668	Soybean	nucleus	68.41	66.0
KRG93309	Soybean	cytosol	53.52	64.06
KRG93311	Soybean	cytosol	53.0	63.04
KRG93310	Soybean	cytosol	52.22	62.5
KRG93306	Soybean	cytosol	51.17	60.87
KRG93308	Soybean	extracellular	22.19	48.02
TraesCS3D01G494500.1	Wheat	cytosol, peroxisome, plastid	26.63	31.0
TraesCS2D01G276900.1	Wheat	plastid	26.37	30.15
TraesCS5D01G524500.1	Wheat	mitochondrion, peroxisome, plastid	26.63	30.0
TraesCS2D01G276600.1	Wheat	cytosol, mitochondrion, plastid	25.33	29.85
TraesCS7D01G143400.1	Wheat	cytosol	24.02	29.58
TraesCS2D01G276700.1	Wheat	mitochondrion	24.54	28.4
TraesCS6D01G358100.1	Wheat	peroxisome	24.02	28.13
TraesCS5D01G287700.1	Wheat	golgi	24.54	27.98
TraesCS6D01G358200.1	Wheat	cytosol	23.76	27.83
TraesCS6D01G229000.1	Wheat	peroxisome	25.07	27.75
TraesCS5D01G287300.2	Wheat	plastid	26.37	27.45
TraesCS3D01G291700.2	Wheat	mitochondrion	25.85	27.27
TraesCS4D01G365600.1	Wheat	plastid	22.19	22.25

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0055114
InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF08240	PFAM:PF13602	InterPro:PKS_ER	ScanProsite:PS01162
PANTHER:PTHR44573	InterPro:Quin_OxRdtase/zeta-crystal_CS	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	EnsemblPlantsGene:TraesCS6D01G122800
EnsemblPlants:TraesCS6D01G122800.1	TIGR:cd05289	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6D:+:87460794..87462242

Molecular Weight (calculated)

39847.9 Da

IEP (calculated)

8.561

GRAVY (calculated)

0.096

Length

383 amino acids

Sequence
(BLAST)

001: MQAFLAYSIL TNPCSRSFFP RPATRPQFLL SSVPAARTSA AATARRCGGP GRSVVTAASS SPAVVTAATD VPGTMKAWAY EEYGDASVLK LDEAVSVPAV
101: GEDQVLVRVA AAALNPVDSK RRMGKFKATD SPLPTVPGYD MAGVVVKVGS QVKNLKEGDE VYGHISEKVL EGPKQFGSLA EYTAVEEKLV ALKPKSIDFA
201: QAAGLPLAIE TAHEGLERAG FSAGKSILVL GGAGGVGTLV IQLAKQVYGA SKVAATASTP KLELLKSLGA DVAIDYTKEN FEDMPEKYDV VFDAVGQGEK
301: AVKVVKEGGS VVVLTGAVAP PGFRFVVTSD GSVLAKLNPY LESGKVKPVV DPKGPFPFSQ VVEAFSYLET GRATGKVVIS PVP

Best Arabidopsis Sequence Match ( AT1G23740.1 )
(BLAST)

001: MNAALATTTA TTPVLRRETP LLHYCSLTTK SPVYQINRVR FGSCVQTVSK KFLKISASSQ SASAAVNVTA DASIPKEMKA WVYSDYGGVD VLKLESNIVV
101: PEIKEDQVLI KVVAAALNPV DAKRRQGKFK ATDSPLPTVP GYDVAGVVVK VGSAVKDLKE GDEVYANVSE KALEGPKQFG SLAEYTAVEE KLLALKPKNI
201: DFAQAAGLPL AIETADEGLV RTEFSAGKSI LVLNGAGGVG SLVIQLAKHV YGASKVAATA STEKLELVRS LGADLAIDYT KENIEDLPDK YDVVFDAIGM
301: CDKAVKVIKE GGKVVALTGA VTPPGFRFVV TSNGDVLKKL NPYIESGKVK PVVDPKGPFP FSRVADAFSY LETNHATGKV VVYPIP

Arabidopsis Description

AORNADPH-dependent alkenal/one oxidoreductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUC1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.