Factsheet for GSMUA_Achr4P07780_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G025630.2	Barley	cytosol	69.9	82.76
KRG93309	Soybean	cytosol	70.87	68.44
KRG93311	Soybean	cytosol	69.58	66.77
KRG93310	Soybean	cytosol	68.61	66.25
KRH07194	Soybean	nucleus	68.28	66.14
TraesCS6D01G122800.1	Wheat	plastid	81.88	66.06
TraesCS6B01G161600.1	Wheat	plastid	81.23	65.54
TraesCS6A01G133100.1	Wheat	plastid	81.23	65.54
KRH56616	Soybean	cytosol	22.33	64.49
Os08t0379400-02	Rice	plastid	78.64	62.31
Zm00001d032332_P001	Maize	plastid	77.02	61.66
KRG93306	Soybean	cytosol	63.11	60.56
HORVU6Hr1G025730.2	Barley	plastid	81.23	59.34
KXG25078	Sorghum	plastid	76.38	59.0
KRG93308	Soybean	extracellular	27.83	48.59
GSMUA_Achr2P06100_001	Banana	mitochondrion	24.92	31.43
GSMUA_Achr6P27730_001	Banana	cytosol	24.6	30.04
GSMUA_Achr4P15790_001	Banana	cytosol	30.42	28.92
GSMUA_Achr2P06110_001	Banana	mitochondrion	31.07	28.83
GSMUA_Achr11P...	Banana	plasma membrane	30.1	28.18
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	23.3	27.17
GSMUA_Achr8P27200_001	Banana	mitochondrion	31.07	26.02
GSMUA_AchrUn_...	Banana	plastid	29.13	25.86
GSMUA_Achr3P15520_001	Banana	mitochondrion	30.74	25.82
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane, vacuole	22.65	24.39

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0055114
EnsemblPlantsGene:GSMUA_Achr4G07780_001	EnsemblPlants:GSMUA_Achr4P07780_001	EnsemblPlants:GSMUA_Achr4T07780_001	InterPro:GroES-like_sf	UniProt:M0SLZ5	InterPro:NAD(P)-bd_dom_sf
PFAM:PF08240	PFAM:PF13602	InterPro:PKS_ER	ScanProsite:PS01162	PANTHER:PTHR44573	InterPro:Quin_OxRdtase/zeta-crystal_CS
SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0002969192	SEG:seg	:

Description

Quinone oxidoreductase-like protein At1g23740, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr4G07780_001]

Coordinates

chr4:+:5790990..5794618

Molecular Weight (calculated)

32768.5 Da

IEP (calculated)

5.273

GRAVY (calculated)

0.055

Length

309 amino acids

Sequence
(BLAST)

001: MKAWVYDDYG AADLLRLDEG VSVPEVKEDQ VLIKVVAAAL NPVDYKRRQG KFKATDSPLP TVPGYDVAGV VVKVGSQVKN LKVGDEVYGD INEKALENPK
101: QFGSLAEYTS VEEKLLALKP KNIDFVQAAG LPLAIETANE GLERSGFSAG KSILVLGGAG GVGSLVIQLA KHVFGASRVA ATASTGKLDL LKSLGADLAI
201: DYTKENFEEL PEKFDVVYDT VGQCEKAVKA VKEAGSVVVL TGAVTPPGFR FVVTSDGAVL SKLNTFIEDG KIKPVVDPKG AFPFSKLVEA FTYLETGRAT
301: GKVVIHPIP

Best Arabidopsis Sequence Match ( AT1G23740.1 )
(BLAST)

001: MNAALATTTA TTPVLRRETP LLHYCSLTTK SPVYQINRVR FGSCVQTVSK KFLKISASSQ SASAAVNVTA DASIPKEMKA WVYSDYGGVD VLKLESNIVV
101: PEIKEDQVLI KVVAAALNPV DAKRRQGKFK ATDSPLPTVP GYDVAGVVVK VGSAVKDLKE GDEVYANVSE KALEGPKQFG SLAEYTAVEE KLLALKPKNI
201: DFAQAAGLPL AIETADEGLV RTEFSAGKSI LVLNGAGGVG SLVIQLAKHV YGASKVAATA STEKLELVRS LGADLAIDYT KENIEDLPDK YDVVFDAIGM
301: CDKAVKVIKE GGKVVALTGA VTPPGFRFVV TSNGDVLKKL NPYIESGKVK PVVDPKGPFP FSRVADAFSY LETNHATGKV VVYPIP

Arabidopsis Description

AORNADPH-dependent alkenal/one oxidoreductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUC1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.