Factsheet for GSMUA_Achr2P06100_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P27730_001	Banana	cytosol	74.29	71.94
GSMUA_Achr2P06110_001	Banana	mitochondrion	93.06	68.47
TraesCS3B01G548400.1	Wheat	cytosol, peroxisome, plastid	49.8	55.96
TraesCS2A01G277700.1	Wheat	plastid	46.94	50.88
TraesCS2D01G276600.1	Wheat	cytosol, mitochondrion, plastid	64.08	48.31
TraesCS3D01G494500.1	Wheat	cytosol, peroxisome, plastid	64.49	48.02
PGSC0003DMT400044064	Potato	cytosol	64.08	47.72
TraesCS2B01G295100.1	Wheat	plastid	63.27	47.69
Solyc09g059040.2.1	Tomato	plastid	63.27	47.11
Solyc09g059030.2.1	Tomato	plastid	62.86	46.81
Bra001207.1-P	Field mustard	cytosol	62.45	46.5
CDY34537	Canola	cytosol	62.45	46.5
CDX80695	Canola	cytosol	62.45	46.5
TraesCS2B01G295200.1	Wheat	plastid	62.04	46.2
HORVU2Hr1G068010.1	Barley	mitochondrion, plastid	62.04	46.2
AT4G13010.1	Thale cress	cytosol	61.63	45.9
TraesCS2D01G276700.1	Wheat	mitochondrion	61.63	45.62
PGSC0003DMT400062565	Potato	cytosol, peroxisome, plastid	61.22	45.59
Os04t0359100-01	Rice	plasma membrane	61.63	45.48
GSMUA_Achr11P...	Banana	plasma membrane	60.82	45.15
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	48.16	44.53
VIT_07s0151g00260.t01	Wine grape	cytosol	60.82	44.08
PGSC0003DMT400022514	Potato	cytosol	58.37	43.33
KRH46629	Soybean	cytosol	57.96	43.16
KRG99627	Soybean	cytosol	57.96	43.16
PGSC0003DMT400044065	Potato	cytosol	58.37	43.07
HORVU2Hr1G067980.1	Barley	extracellular	63.27	42.58
KRH23756	Soybean	endoplasmic reticulum	56.73	42.38
Os04t0358000-01	Rice	endoplasmic reticulum	54.69	42.27
KRH44933	Soybean	cytosol, peroxisome	51.02	41.95
VIT_07s0151g00090.t01	Wine grape	mitochondrion	64.08	40.99
Solyc09g059020.2.1	Tomato	cytosol, extracellular, peroxisome	45.71	40.88
Os04t0359700-00	Rice	cytosol, mitochondrion, peroxisome, plastid	60.0	40.72
VIT_07s0151g00200.t01	Wine grape	cytosol, mitochondrion, plastid	39.59	39.11
PGSC0003DMT400090732	Potato	plastid	25.71	28.64
GSMUA_Achr4P07780_001	Banana	cytosol	31.43	24.92
GSMUA_Achr4P15790_001	Banana	cytosol	28.57	21.54
GSMUA_AchrUn_...	Banana	plastid	27.76	19.54
HORVU2Hr1G076890.1	Barley	cytosol	17.14	19.53
GSMUA_Achr3P15520_001	Banana	mitochondrion	26.94	17.93
GSMUA_Achr8P27200_001	Banana	mitochondrion	26.12	17.34
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane, vacuole	20.0	17.07

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	InterPro:ADH_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr2G06100_001	EnsemblPlants:GSMUA_Achr2P06100_001
EnsemblPlants:GSMUA_Achr2T06100_001	InterPro:GroES-like_sf	UniProt:M0S5K1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF08240	PFAM:PF13602
InterPro:PKS_ER	PANTHER:PTHR44013	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI0002962EFA
SEG:seg	:	:	:	:	:

Description

Quinone-oxidoreductase homolog, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr2G06100_001]

Coordinates

chr2:-:11002306..11004268

Molecular Weight (calculated)

25689.1 Da

IEP (calculated)

6.961

GRAVY (calculated)

0.188

Length

245 amino acids

Sequence
(BLAST)

001: MAARTMRAVQ YGGYGGGAAA LQHVEIQVPS PKKDEVLLRV EAASMNPADW KVQKGAFRPF LPSKFPFVPV SDVAGEVVEV GPGVDGFKPG DKVVTWLGFK
101: AGGLAEYAVA PVNLTVHIPP EVSAADAAGL PIAGFTALQA LRYATTKFDG TGDPANVLIT AASGGVGTFA VQIAKLGNLH KLVVLFATAT KEDLQFLVEL
201: VKGGKLRTVI DSRYALGKAE EAWAKSMEGH ATGKIIVECD QVMDI

Best Arabidopsis Sequence Match ( AT4G13010.1 )
(BLAST)

001: MAGKLMHALQ YNSYGGGAAG LEHVQVPVPT PKSNEVCLKL EATSLNPVDW KIQKGMIRPF LPRKFPCIPA TDVAGEVVEV GSGVKNFKAG DKVVAVLSHL
101: GGGGLAEFAV ATEKLTVKRP QEVGAAEAAA LPVAGLTALQ ALTNPAGLKL DGTGKKANIL VTAASGGVGH YAVQLAKLAN AHVTATCGAR NIEFVKSLGA
201: DEVLDYKTPE GAALKSPSGK KYDAVVHCAN GIPFSVFEPN LSENGKVIDI TPGPNAMWTY AVKKITMSKK QLVPLLLIPK AENLEFMVNL VKEGKVKTVI
301: DSKHPLSKAE DAWAKSIDGH ATGKIIVEP

Arabidopsis Description

CEQORHChloroplast envelope quinone oxidoreductase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9SV68]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.