Factsheet for GSMUA_AchrUn_randomP13890_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
peroxisome 3
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr2P15100_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G56460.1	GSMUA_Achr2P15100_001	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67648	Canola	extracellular	49.71	77.23
Solyc03g095360.2.1	Tomato	plastid	75.57	75.57
VIT_13s0067g00160.t01	Wine grape	peroxisome	74.71	75.36
AT3G56460.1	Thale cress	cytosol	75.0	75.0
KRH64241	Soybean	nucleus	74.14	74.57
CDY32016	Canola	peroxisome	74.43	74.43
KRH53690	Soybean	cytosol, peroxisome, plasma membrane	73.56	73.78
EES12890	Sorghum	plastid	70.11	70.52
HORVU6Hr1G063770.1	Barley	peroxisome	70.11	70.52
Zm00001d002246_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	70.4	70.0
TraesCS6B01G277800.1	Wheat	peroxisome	69.25	69.65
TraesCS6D01G229000.1	Wheat	peroxisome	68.97	69.36
TraesCS6A01G246800.1	Wheat	peroxisome	68.97	69.36
Os05t0313500-01	Rice	peroxisome, plastid	65.8	68.36
Solyc03g095320.1.1	Tomato	cytosol, plastid	16.09	63.64
Bra003241.1-P	Field mustard	cytosol	73.85	55.03
GSMUA_Achr4P07780_001	Banana	cytosol	25.86	29.13
GSMUA_Achr2P06100_001	Banana	mitochondrion	19.54	27.76
GSMUA_Achr4P15790_001	Banana	cytosol	24.14	25.85
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	18.97	24.91
GSMUA_Achr2P06110_001	Banana	mitochondrion	23.56	24.62
GSMUA_Achr6P27730_001	Banana	cytosol	17.82	24.51
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane, vacuole	20.11	24.39
GSMUA_Achr11P...	Banana	plasma membrane	21.84	23.03
GSMUA_Achr8P27200_001	Banana	mitochondrion	23.85	22.49
GSMUA_Achr3P15520_001	Banana	mitochondrion	22.99	21.74

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C	InterPro:ADH_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005777	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0055114
EnsemblPlantsGene:GSMUA_AchrUn_randomG13890_001	EnsemblPlants:GSMUA_AchrUn_randomP13890_001	EnsemblPlants:GSMUA_AchrUn_randomT13890_001	InterPro:GroES-like_sf	UniProt:M0U8Z8	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	ScanProsite:PS01162	PANTHER:PTHR43677	PANTHER:PTHR43677:SF4
InterPro:Quin_OxRdtase/zeta-crystal_CS	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000294DE6F	SEG:seg

Description

Putative Quinone oxidoreductase-like protein 2 homolog [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG13890_001]

Coordinates

chrchrUn_random:+:65666712..65671247

Molecular Weight (calculated)

36890.3 Da

IEP (calculated)

9.614

GRAVY (calculated)

0.365

Length

348 amino acids

Sequence
(BLAST)

001: MEALVCMKLG DPTVPMTSDS SPIAAVTKFH PVPAISSSTS VRVRIRATSL NFANYLQILG RYQEKPPLPF IPGSDYSGVV ESVGSGVSRF KVGDKVCSFA
101: ALGSFAEFIV VDEKDLFLVP EGCDLIAAAA LPVAFGTSHV ALVHRAQLKP GQVLLVLGAA GGVGISAVQI GKVCGAIVIA VARGDEKVQF LKSLGVDYAV
201: DLGKGNIIES VKNFLKSRNL KGVDVLYDPV GGKLTKECMK LLNWGANILI IGFASGEVPV IPANIALVKN WTVHGLYWGS YKLHQPHILR NSLEELLSWL
301: SKGLLTVHIS HSYSLSQADL AFAAIKDRKA IGKVMIALGG STAGRSKL

Best Arabidopsis Sequence Match ( AT3G56460.1 )
(BLAST)

001: MEALVCRKLG DPTATNPGSP ESPVEVSKTH PIPSLNSDTS VRVRVIATSL NYANYLQILG KYQEKPPLPF IPGSDYSGIV DAIGPAVTKF RVGDRVCSFA
101: DLGSFAQFIV ADQSRLFLVP ERCDMVAAAA LPVAFGTSHV ALVHRARLTS GQVLLVLGAA GGVGLAAVQI GKVCGAIVIA VARGTEKIQL LKSMGVDHVV
201: DLGTENVISS VKEFIKTRKL KGVDVLYDPV GGKLTKESMK VLKWGAQILV IGFASGEIPV IPANIALVKN WTVHGLYWGS YRIHQPNVLE DSIKELLSWL
301: SRGLITIHIS HTYSLSQANL AFGDLKDRKA IGKVMIALDH KTALSSKL

Arabidopsis Description

GroES-like zinc-binding alcohol dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LXZ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.