CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
peroxisome 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
Predotar:	plastid
PProwler:	peroxisome
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU92006

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G56460.1	OQU92006	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002246_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	95.95	94.86
HORVU6Hr1G063770.1	Barley	peroxisome	88.15	88.15
TraesCS6B01G277800.1	Wheat	peroxisome	86.13	86.13
TraesCS6A01G246800.1	Wheat	peroxisome	86.13	86.13
TraesCS6D01G229000.1	Wheat	peroxisome	85.84	85.84
Os05t0313500-01	Rice	peroxisome, plastid	82.37	85.07
Solyc03g095360.2.1	Tomato	plastid	72.54	72.13
VIT_13s0067g00160.t01	Wine grape	peroxisome	70.81	71.01
KRH64241	Soybean	nucleus	70.23	70.23
GSMUA_AchrUn_...	Banana	plastid	70.52	70.11
KRH53690	Soybean	cytosol, peroxisome, plasma membrane	69.94	69.74
CDX67648	Canola	extracellular	44.51	68.75
AT3G56460.1	Thale cress	cytosol	69.08	68.68
CDY32016	Canola	peroxisome	68.21	67.82
Solyc03g095320.1.1	Tomato	cytosol, plastid	16.18	63.64
Bra003241.1-P	Field mustard	cytosol	68.79	50.96
OQU85913	Sorghum	cytosol	24.86	26.22
OQU83589	Sorghum	cytosol	23.7	25.87
KXG25078	Sorghum	plastid	29.19	25.25
EES10573	Sorghum	plastid	23.7	23.84
OQU89739	Sorghum	cytosol	23.41	23.75
EER97004	Sorghum	cytosol, peroxisome, plastid	22.83	23.17
KXG40429	Sorghum	plastid	25.14	22.66
KXG33382	Sorghum	plastid	23.12	19.09

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	EntrezGene:8066815	InterPro:ADH_C	InterPro:ADH_N
UniProt:C5YG81	EnsemblPlants:EES12890	ProteinID:EES12890	ProteinID:EES12890.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00107	PFAM:PF08240	InterPro:PKS_ER	ScanProsite:PS01162	PANTHER:PTHR43677
PANTHER:PTHR43677:SF4	InterPro:Quin_OxRdtase/zeta-crystal_CS	SMART:SM00829	EnsemblPlantsGene:SORBI_3006G222100	SUPFAM:SSF50129	SUPFAM:SSF51735
unigene:Sbi.1754	UniParc:UPI0001A876E8	RefSeq:XP_002448562.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:-:56857071..56862743

Molecular Weight (calculated)

36411.5 Da

IEP (calculated)

9.545

GRAVY (calculated)

0.347

Length

346 amino acids

Sequence
(BLAST)

001: MEALVVRRLG DPTLAPGGEA SPFAAVSGDH PVPEISSPTA VRVRVAATSL NFATFLQVQG KYQERPPLPF VPGSDYSGVV DAVGPGVRGL RPGDRVCSFT
101: GLGSFADFIV AEEKQLFLVP DGCDLVTAGA LPVAFGTSHL ALVHRAQLKA GQVLLVLGAA GGVGVSAVQI GKVCGAVVIA VARGAEKSEY LKSIGADHVV
201: DSSKDNVVES AKSFLKARGL KGVDVLYDPV GGKLTQDSLK LLSWGAHILV IGFASGDVPV IRANIALVKN WTVHGLYWGS YLIHRPRVLI DSLNELLSWL
301: SKGLIKVQIS HCYRLVEAHL AFSALRDRKA VGKVMIVMGP SAVSRL

Best Arabidopsis Sequence Match ( AT3G56460.1 )
(BLAST)

001: MEALVCRKLG DPTATNPGSP ESPVEVSKTH PIPSLNSDTS VRVRVIATSL NYANYLQILG KYQEKPPLPF IPGSDYSGIV DAIGPAVTKF RVGDRVCSFA
101: DLGSFAQFIV ADQSRLFLVP ERCDMVAAAA LPVAFGTSHV ALVHRARLTS GQVLLVLGAA GGVGLAAVQI GKVCGAIVIA VARGTEKIQL LKSMGVDHVV
201: DLGTENVISS VKEFIKTRKL KGVDVLYDPV GGKLTKESMK VLKWGAQILV IGFASGEIPV IPANIALVKN WTVHGLYWGS YRIHQPNVLE DSIKELLSWL
301: SRGLITIHIS HTYSLSQANL AFGDLKDRKA IGKVMIALDH KTALSSKL

Arabidopsis Description

GroES-like zinc-binding alcohol dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LXZ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.