Factsheet for HORVU5Hr1G075550.8

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

vacuole: 16581873

msms PMID: 16581873 doi

A Endler, S Meyer, S Schelbert, T Schneider, W Weschke, SW Peters, F Keller, S Baginsky, E Martinoia, UG Schmidt

University of Zurich, Institute of Plant Biology, CH-8008 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G279900.1	Wheat	golgi	95.54	95.54
TraesCS5D01G287700.1	Wheat	golgi	94.94	94.94
TraesCS5A01G280800.1	Wheat	cytosol, peroxisome, plastid	94.64	94.64
OQU89739	Sorghum	cytosol	79.76	78.59
Zm00001d021025_P001	Maize	mitochondrion, peroxisome, plastid	78.87	76.59
Os09t0503100-01	Rice	plasma membrane	77.08	74.86
HORVU5Hr1G034160.1	Barley	cytosol, plastid	39.58	65.2
HORVU5Hr1G075540.2	Barley	peroxisome, plastid	64.58	62.9
HORVU2Hr1G042270.1	Barley	cytosol, plastid	25.6	57.33
HORVU2Hr1G068010.1	Barley	mitochondrion, plastid	52.38	53.5
HORVU2Hr1G067980.1	Barley	extracellular	54.17	50.0
HORVU5Hr1G034150.2	Barley	nucleus	42.56	42.43
HORVU2Hr1G076890.1	Barley	cytosol	23.51	36.74
HORVU6Hr1G025630.2	Barley	cytosol	22.62	29.12
HORVU6Hr1G088160.7	Barley	cytosol, mitochondrion, peroxisome	28.87	27.79
HORVU3Hr1G072320.2	Barley	mitochondrion	27.68	25.62
HORVU6Hr1G025730.2	Barley	plastid	28.87	22.93
HORVU4Hr1G088610.1	Barley	plastid	24.11	21.49
HORVU6Hr1G063770.1	Barley	peroxisome	22.02	21.39

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:35.1	UniProt:A0A287RUA6	InterPro:ADH_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf
EnsemblPlantsGene:HORVU5Hr1G075550	EnsemblPlants:HORVU5Hr1G075550.8	InterPro:NAD(P)-bd_dom_sf	PFAM:PF08240	PFAM:PF13602	InterPro:PKS_ER
PANTHER:PTHR44013	PANTHER:PTHR44013:SF3	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI000B47DB38
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:547396608..547424321

Molecular Weight (calculated)

34601.9 Da

IEP (calculated)

9.325

GRAVY (calculated)

0.091

Length

336 amino acids

Sequence
(BLAST)

001: MATPRTMKAV QYDKYGGGAE GLKHVEVPVP SPKKGEVLLK MEAASINPID WKIQKGMLRP FLPGKFPFTP VGDLAGEVVE LGSGVTNFKP GDKVISISFP
101: VSGGLAEYAV APASLTVARP PEVSAVDGAC LPAAASSALQ LLKLAGVSFD GTSGATGPKN ALVTAASGGV GHYAVQLAKL AGLHVTATCG ARNVDFVRGL
201: GADEVLDYRT PEGAALRGPS GRRYDAVANC AAGVPWPALK AVLADEGGTV ADVTPGVSAA LTSILQKATF AKKRLAPLML APRREEMEWL VGLAGQGKLR
301: TVVDSRFPLS RAQEAWAKSV EGHATGKIVV EIGGTE

Best Arabidopsis Sequence Match ( AT4G13010.1 )
(BLAST)

001: MAGKLMHALQ YNSYGGGAAG LEHVQVPVPT PKSNEVCLKL EATSLNPVDW KIQKGMIRPF LPRKFPCIPA TDVAGEVVEV GSGVKNFKAG DKVVAVLSHL
101: GGGGLAEFAV ATEKLTVKRP QEVGAAEAAA LPVAGLTALQ ALTNPAGLKL DGTGKKANIL VTAASGGVGH YAVQLAKLAN AHVTATCGAR NIEFVKSLGA
201: DEVLDYKTPE GAALKSPSGK KYDAVVHCAN GIPFSVFEPN LSENGKVIDI TPGPNAMWTY AVKKITMSKK QLVPLLLIPK AENLEFMVNL VKEGKVKTVI
301: DSKHPLSKAE DAWAKSIDGH ATGKIIVEP

Arabidopsis Description

CEQORHChloroplast envelope quinone oxidoreductase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9SV68]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.