Factsheet for HORVU5Hr1G034150.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G034160.1	Barley	cytosol, plastid	31.75	52.45
HORVU2Hr1G042270.1	Barley	cytosol, plastid	21.96	49.33
HORVU5Hr1G075550.8	Barley	vacuole	42.43	42.56
HORVU5Hr1G075540.2	Barley	peroxisome, plastid	35.91	35.07
PGSC0003DMT400090732	Potato	plastid	21.07	32.27
Solyc09g059030.2.1	Tomato	plastid	29.97	30.7
PGSC0003DMT400062565	Potato	cytosol, peroxisome, plastid	29.67	30.4
Bra001207.1-P	Field mustard	cytosol	29.08	29.79
CDY34537	Canola	cytosol	29.08	29.79
CDX80695	Canola	cytosol	29.08	29.79
AT4G13010.1	Thale cress	cytosol	28.78	29.48
PGSC0003DMT400044064	Potato	cytosol	28.78	29.48
KRG99627	Soybean	cytosol	28.49	29.18
Solyc09g059040.2.1	Tomato	plastid	28.19	28.88
KRH23756	Soybean	endoplasmic reticulum	27.3	28.05
PGSC0003DMT400044065	Potato	cytosol	27.6	28.01
PGSC0003DMT400022514	Potato	cytosol	27.3	27.88
KRH46629	Soybean	cytosol	27.0	27.66
VIT_07s0151g00260.t01	Wine grape	cytosol	27.3	27.22
VIT_07s0151g00090.t01	Wine grape	mitochondrion	30.27	26.63
HORVU2Hr1G068010.1	Barley	mitochondrion, plastid	25.52	26.14
KRH44933	Soybean	cytosol, peroxisome	22.26	25.17
HORVU2Hr1G067980.1	Barley	extracellular	26.71	24.73
Solyc09g059020.2.1	Tomato	cytosol, extracellular, peroxisome	16.62	20.44
VIT_07s0151g00200.t01	Wine grape	cytosol, mitochondrion, plastid	12.76	17.34
HORVU6Hr1G088160.7	Barley	cytosol, mitochondrion, peroxisome	16.02	15.47
HORVU3Hr1G072320.2	Barley	mitochondrion	16.02	14.88
HORVU6Hr1G063770.1	Barley	peroxisome	15.13	14.74
HORVU4Hr1G088610.1	Barley	plastid	15.73	14.06
HORVU6Hr1G025630.2	Barley	cytosol	10.68	13.79
HORVU6Hr1G025730.2	Barley	plastid	16.91	13.48
HORVU2Hr1G076890.1	Barley	cytosol	5.34	8.37

Protein Annotations

EnsemblPlants:HORVU5Hr1G034150.2	EnsemblPlantsGene:HORVU5Hr1G034150	Gene3D:3.90.180.10	GO:GO:0008150	GO:GO:0008152	GO:GO:0055114
InterPro:ADH_N	InterPro:GroES-like_sf	PANTHER:PTHR44013	PANTHER:PTHR44013:SF3	PFAM:PF08240	SEG:seg
SUPFAM:SSF50129	UniParc:UPI000B485DF7	UniProt:A0A287QTS4	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr5H:-:230008423..230010012

Molecular Weight (calculated)

31290.6 Da

IEP (calculated)

12.322

GRAVY (calculated)

-0.742

Length

337 amino acids

Sequence
(BLAST)

001: MATPRTMKAV QYDKYGGGAE GLKHVEVPVP SPKKGEVLLK MEAASINPID WKIQKGMLRP FLPGKFPFTP VGDLAGEVVE LGSGVTNFKP GDKVISISFP
101: VRRRWARRVR GGPGVAHGGE AAGGVRRRRR LPSGRRQQRA AAAQARRGQL RRDLRRHRPE ERAGDRGLGR RGPLRRAASQ AGRPARHGHL RRAQRGLRPG
201: PGRRRGARLQ DARGRGAAGP VGQEVRRGGE LRGGGAVAGA QGGAGRRGRH GGRRHAGGQR CAHVDPAEGD LRQEEAGAAD AGAEEGGDGV AGGLGGXXXX
301: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXX

Best Arabidopsis Sequence Match ( AT4G13010.1 )
(BLAST)

001: MAGKLMHALQ YNSYGGGAAG LEHVQVPVPT PKSNEVCLKL EATSLNPVDW KIQKGMIRPF LPRKFPCIPA TDVAGEVVEV GSGVKNFKAG DKVVAVLSHL
101: GGGGLAEFAV ATEKLTVKRP QEVGAAEAAA LPVAGLTALQ ALTNPAGLKL DGTGKKANIL VTAASGGVGH YAVQLAKLAN AHVTATCGAR NIEFVKSLGA
201: DEVLDYKTPE GAALKSPSGK KYDAVVHCAN GIPFSVFEPN LSENGKVIDI TPGPNAMWTY AVKKITMSKK QLVPLLLIPK AENLEFMVNL VKEGKVKTVI
301: DSKHPLSKAE DAWAKSIDGH ATGKIIVEP

Arabidopsis Description

CEQORHChloroplast envelope quinone oxidoreductase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9SV68]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.