Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G090270.10 | Barley | cytosol | 97.67 | 96.77 |
| TraesCSU01G129500.1 | Wheat | cytosol, mitochondrion | 95.81 | 95.37 |
| TraesCS4B01G379200.1 | Wheat | cytosol | 85.58 | 90.64 |
| TraesCS1A01G215800.1 | Wheat | cytosol | 82.79 | 82.79 |
| GSMUA_AchrUn_... | Banana | cytosol | 79.07 | 79.81 |
| VIT_02s0236g00140.t01 | Wine grape | cytosol | 77.21 | 77.93 |
| GSMUA_Achr4P30070_001 | Banana | cytosol | 77.21 | 77.93 |
| GSMUA_Achr4P26350_001 | Banana | cytosol | 74.42 | 75.12 |
| Bra040169.1-P | Field mustard | cytosol | 73.95 | 74.65 |
| CDY38412 | Canola | cytosol | 73.95 | 74.65 |
| Bra012655.1-P | Field mustard | cytosol | 73.49 | 74.18 |
| CDX78784 | Canola | cytosol | 73.49 | 74.18 |
| CDX90465 | Canola | cytosol | 73.49 | 74.18 |
| Solyc08g077770.2.1 | Tomato | cytosol | 73.02 | 73.71 |
| PGSC0003DMT400011576 | Potato | cytosol | 72.56 | 73.24 |
| CDY09616 | Canola | cytosol | 72.56 | 73.24 |
| AT5G47100.1 | Thale cress | cytosol | 72.56 | 73.24 |
| PGSC0003DMT400068352 | Potato | cytosol | 73.02 | 73.02 |
| VIT_02s0236g00150.t01 | Wine grape | cytosol | 75.35 | 72.65 |
| CDY69850 | Canola | cytosol | 71.63 | 72.3 |
| CDY28977 | Canola | cytosol | 71.63 | 72.3 |
| Bra017504.1-P | Field mustard | cytosol | 71.63 | 72.3 |
| Bra022104.1-P | Field mustard | cytosol | 71.63 | 72.3 |
| CDY25987 | Canola | cytosol | 71.63 | 72.3 |
| CDY40580 | Canola | cytosol | 70.7 | 71.36 |
| KRH57533 | Soybean | mitochondrion | 69.77 | 70.42 |
| KRH28207 | Soybean | cytosol | 68.84 | 69.81 |
| Solyc06g060980.1.1 | Tomato | cytosol, mitochondrion | 68.84 | 68.84 |
| Solyc08g007160.2.1 | Tomato | cytosol | 68.37 | 68.37 |
| KRH04244 | Soybean | cytosol | 65.12 | 63.93 |
| TraesCS5A01G060600.1 | Wheat | cytosol | 63.72 | 60.89 |
| TraesCS4A01G245500.1 | Wheat | cytosol | 63.72 | 60.89 |
| TraesCS5A01G124700.1 | Wheat | cytosol | 60.93 | 57.96 |
| AT4G17615.3 | Thale cress | cytosol | 67.91 | 57.94 |
| TraesCS1A01G261200.1 | Wheat | cytosol | 55.81 | 53.57 |
| PGSC0003DMT400052805 | Potato | cytosol | 63.26 | 52.11 |
| TraesCS1A01G352200.1 | Wheat | cytosol | 53.49 | 51.8 |
| TraesCS3A01G053300.1 | Wheat | golgi | 57.21 | 42.12 |
| TraesCS3A01G208300.2 | Wheat | cytosol, mitochondrion | 59.07 | 34.99 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G545500.2 | EnsemblPlantsGene:TraesCS5A01G545500 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23056 | PANTHER:PTHR23056:SF41 |
| PFAM:PF13499 | PFscan:PS50222 | PRINTS:PR00450 | ScanProsite:PS00018 | SMART:SM00054 | SUPFAM:SSF47473 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5A:+:700435214..700438552
Molecular Weight (calculated)
24673.5 Da
IEP (calculated)
4.520
GRAVY (calculated)
-0.152
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCFHSTARA RRRYPGYDDP MQLAAQTAFS VSEVEALFEL FKTISGSVID DGFINKVEEF QLALFKSKMD NIFANRIFDL FDVKKRGVID FADFVQALNV
101: FHPSIPMEEK IDFSFKLYDM DNTGFIERKE VKQMLIALLS ESGMRLSDET IESIIDKTFS DADVNQDGKI DRAEWENFVS RNPSLMKIMT LPYLKDITTT
201: FPSFVFNSKV DDIVT
101: FHPSIPMEEK IDFSFKLYDM DNTGFIERKE VKQMLIALLS ESGMRLSDET IESIIDKTFS DADVNQDGKI DRAEWENFVS RNPSLMKIMT LPYLKDITTT
201: FPSFVFNSKV DDIVT
001: MGCFHSKAAK EFRGHEDPVK LASETAFSVS EVEALFELFK SISSSVVDDG LINKEEFQLA LFKSRKRENI FANRIFDMFD VKRKGVIDFG DFVRSLNVFH
101: PNASLEDKID FTFRLYDMDC TGYIERQEVK QMLIALLCES EMKLADETIE IILDKTFEDA DVNQDGKIDK LEWSDFVNKN PSLLKIMTLP YLRDITTTFP
201: SFVFHSEVDE IAT
101: PNASLEDKID FTFRLYDMDC TGYIERQEVK QMLIALLCES EMKLADETIE IILDKTFEDA DVNQDGKIDK LEWSDFVNKN PSLLKIMTLP YLRDITTTFP
201: SFVFHSEVDE IAT
Arabidopsis Description
CBL1calcineurin B-like protein 1 [Source:TAIR;Acc:AT4G17615]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.