Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G124300.1 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS5D01G132500.2 | Wheat | cytosol | 99.56 | 99.56 |
| EES16698 | Sorghum | cytosol | 93.36 | 94.62 |
| Zm00001d023504_P001 | Maize | cytosol | 93.36 | 94.62 |
| Zm00001d023506_P001 | Maize | cytosol | 93.36 | 94.62 |
| Os12t0162400-01 | Rice | plasma membrane | 93.81 | 93.81 |
| HORVU5Hr1G040030.6 | Barley | cytosol | 92.48 | 92.07 |
| TraesCS4A01G245500.1 | Wheat | cytosol | 83.19 | 83.56 |
| TraesCS5A01G060600.1 | Wheat | cytosol | 80.97 | 81.33 |
| TraesCS1A01G215800.1 | Wheat | cytosol | 58.85 | 61.86 |
| TraesCS5A01G545500.2 | Wheat | cytosol | 57.96 | 60.93 |
| TraesCS1A01G352200.1 | Wheat | cytosol | 52.65 | 53.6 |
| TraesCS1A01G261200.1 | Wheat | cytosol | 51.77 | 52.23 |
| TraesCS3A01G053300.1 | Wheat | golgi | 61.06 | 47.26 |
| TraesCS3A01G208300.2 | Wheat | cytosol, mitochondrion | 61.95 | 38.57 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G124700.1 | EnsemblPlantsGene:TraesCS5A01G124700 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | InterPro:IPR002048 | ncoils:Coil | PANTHER:PTHR23056 | PANTHER:PTHR23056:SF83 |
| PFAM:PF13499 | PFAM:PF13833 | PFscan:PS50222 | PRINTS:PR00450 | SEG:seg | SMART:SM00054 |
| SUPFAM:SSF47473 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5A:+:273447915..273452433
Molecular Weight (calculated)
26027.1 Da
IEP (calculated)
4.531
GRAVY (calculated)
-0.292
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDFPEGLRR LAALLLKCCD LDIPNRPKGL EDPERLARET VFSVNEIEAL YELFKKISSA VVDDGVINKE EFQLALFKTN RKDSMFADRV FDLFDTKHNG
101: ILEFEEFVRA LSVFHPNAPV DDKIDFAFKL YDLKQQGFIE KQEVKQMVVA TLAESGMNLS DEVIEGIIDK TFEEADTKHD GKIDKEEWRN LVLRHPSLLK
201: NMTLPYLRDI TTTFPSFVFN SQVEDA
101: ILEFEEFVRA LSVFHPNAPV DDKIDFAFKL YDLKQQGFIE KQEVKQMVVA TLAESGMNLS DEVIEGIIDK TFEEADTKHD GKIDKEEWRN LVLRHPSLLK
201: NMTLPYLRDI TTTFPSFVFN SQVEDA
001: MMMQCLDGLK HLALILLTCC DADPPKVRQN PKDVARGTVF TVNEIEALYE LFKSISKNGL IDKEQFQLVL FKMNTTRSLF ADRVFDLFDT KNTGILDFEA
101: FARSLSVFHP NAKFEDKIEF SFKLYDLNQQ GYIKRQEVKQ MVVRTLAESG MNLSDHVIES IIDKTFEEAD TKLDGKIDKE EWRSLVLRHP SLLQNMSLQH
201: LKDVTKTFPN FVFHTIVTDT PSELDG
101: FARSLSVFHP NAKFEDKIEF SFKLYDLNQQ GYIKRQEVKQ MVVRTLAESG MNLSDHVIES IIDKTFEEAD TKLDGKIDKE EWRSLVLRHP SLLQNMSLQH
201: LKDVTKTFPN FVFHTIVTDT PSELDG
Arabidopsis Description
CBL6Calcineurin B-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P6]
SUBAcon: [extracellular,cytosol]
SUBAcon: [extracellular,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.