Factsheet for Os12t0162400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
cytosol 3
plasma membrane 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G124700.1	Wheat	cytosol	93.81	93.81
TraesCS5B01G124300.1	Wheat	cytosol	93.81	93.81
TraesCS5D01G132500.2	Wheat	cytosol	93.36	93.36
EES16698	Sorghum	cytosol	92.04	93.27
HORVU5Hr1G040030.6	Barley	cytosol	86.28	85.9
Os03t0626800-01	Rice	cytosol	83.19	83.56
Os12t0597000-01	Rice	plasma membrane, vacuole	81.42	81.78
Zm00001d041921_P001	Maize	cytosol	26.99	74.39
Os02t0480800-00	Rice	cytosol	42.92	71.32
Os10t0564800-01	Rice	plasma membrane	60.18	63.85
Os02t0291000-00	Rice	cytosol	51.33	54.46
Os05t0534400-01	Rice	plasma membrane	50.44	54.29
Os02t0291400-00	Rice	plasma membrane	50.44	53.52
Os01t0598200-01	Rice	cytosol, mitochondrion	49.56	51.38
Os01t0711500-00	Rice	plastid	57.08	48.5
Os01t0579600-01	Rice	cytosol	31.42	32.57

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	EntrezGene:4351575	ProteinID:ABA96549.2	ProteinID:ABG21894.1	ProteinID:BAF29242.1
ProteinID:BAT15998.1	EMBL:DQ201200	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	GO:GO:0046872	InterPro:IPR002048	EnsemblPlantsGene:Os12g0162400	EnsemblPlants:Os12t0162400-01	PFAM:PF13499
PFAM:PF13833	PRINTS:PR00450	PFscan:PS50222	PANTHER:PTHR23056	PANTHER:PTHR23056:SF83	UniProt:Q3HRP1
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI00005C504C	RefSeq:XP_015618145.1	:	:

Description

CALCINEURIN B-LIKE PROTEIN 6Similar to Calcineurin B-like protein 3 (SOS3-like calcium binding protein 6). (Os12t0162400-01)

Coordinates

chr12:-:3145079..3149502

Molecular Weight (calculated)

25880.8 Da

IEP (calculated)

4.612

GRAVY (calculated)

-0.323

Length

226 amino acids

Sequence
(BLAST)

001: MVDSSEGLRR LAALLFKCCS LDSSNRPNGL QDPERLARET VFNVNEIEAL YELFKKISSA VVDDGLINKE EFQLALFKTN RKDSMFADRV FDLFDTKHNG
101: ILGFEEFARA LSVFHPNAPI DDKIDFAFKL YDLKQQGFIE KQEVKQMVVA TLAESGMNLS DEIIEGIIDK TFEEADTKHD GKIDKEEWRN LVLRHPSLLK
201: NMTLPYLRDI TTTFPSFVFN SQVEDA

Best Arabidopsis Sequence Match ( AT4G26570.1 )
(BLAST)

001: MSQCIDGFKH VCSSFFRCFD IDIYKQSGGL GDPELLARET VFSVSEIEAL YELFKKISSA VIDDGLINKE EFQLALFKTN KKESLFADRV FDLFDTKHNG
101: ILGFEEFARA LSVFHPNAPI EDKIDFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLS DEIIESIIDK TFEEADTKHD GRIDKEEWRT LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVEDT

Arabidopsis Description

ATCBL3calcineurin B-like 3 [Source:TAIR;Acc:AT4G26570]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.