Factsheet for Os05t0534400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 15980189

gfp PMID: 15980189 doi

YS Hwang, PC Bethke, YH Cheong, HS Chang, T Zhu, RL Jones

Department of Plant and Microbial Biology, University of California, Berkeley, California 94720-3102, USA.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os07t0150700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G64480.1	Os07t0150700-01	AT1G30270.1	16814720

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22403	Sorghum	cytosol	84.76	83.96
TraesCS1B01G370900.1	Wheat	mitochondrion	85.24	82.11
TraesCS1D01G358400.1	Wheat	mitochondrion	84.76	81.65
TraesCS1A01G352200.1	Wheat	cytosol	84.76	80.18
HORVU1Hr1G080790.11	Barley	cytosol	73.33	78.97
TraesCS1B01G370500.1	Wheat	cytosol	83.33	78.83
TraesCS1D01G358200.2	Wheat	cytosol, plastid	84.76	78.41
TraesCS1B01G370800.1	Wheat	cytosol	80.95	76.58
GSMUA_Achr1P13790_001	Banana	cytosol	74.76	72.69
TraesCS1B01G370600.1	Wheat	nucleus	50.48	72.11
GSMUA_Achr1P13780_001	Banana	cytosol	65.71	70.77
Os02t0291000-00	Rice	cytosol	71.43	70.42
Os02t0291400-00	Rice	plasma membrane	70.0	69.01
Os01t0598200-01	Rice	cytosol, mitochondrion	68.57	66.06
VIT_02s0025g01640.t01	Wine grape	cytosol	66.67	63.93
AT1G64480.1	Thale cress	cytosol, mitochondrion	63.33	62.15
CDY64882	Canola	mitochondrion	62.86	61.68
CDY46533	Canola	mitochondrion	62.86	61.68
Bra027703.1-P	Field mustard	mitochondrion	62.86	61.68
HORVU1Hr1G080820.4	Barley	cytosol, nucleus, plastid	72.38	60.08
Os10t0564800-01	Rice	plasma membrane	59.05	58.22
Solyc12g055920.1.1	Tomato	cytosol, mitochondrion	62.38	57.96
PGSC0003DMT400046089	Potato	cytosol	53.33	57.44
Zm00001d038730_P001	Maize	cytosol	84.76	57.23
TraesCS4D01G162400.1	Wheat	cytosol	57.62	56.81
Os02t0480800-00	Rice	cytosol	33.81	52.21
Os12t0597000-01	Rice	plasma membrane, vacuole	55.71	52.0
Solyc08g036590.1.1	Tomato	endoplasmic reticulum, extracellular	55.71	51.09
Os12t0162400-01	Rice	plasma membrane	54.29	50.44
Os03t0626800-01	Rice	cytosol	53.81	50.22
Solyc08g054570.1.1	Tomato	cytosol	41.43	46.77
Os01t0711500-00	Rice	plastid	53.33	42.11
HORVU1Hr1G080780.4	Barley	golgi, nucleus	83.33	37.47
Os01t0579600-01	Rice	cytosol	31.9	30.73

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	EntrezGene:4339432	ProteinID:AAS75223.1	ProteinID:AAT47091.1	EMBL:AK101368
ProteinID:BAF18062.1	ProteinID:BAS95062.1	EMBL:DQ201198	ProteinID:EEE64483.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0016020	GO:GO:0046872	InterPro:IPR002048	EnsemblPlantsGene:Os05g0534400	EnsemblPlants:Os05t0534400-01
PFAM:PF13499	PFAM:PF13833	PRINTS:PR00450	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR23056
PANTHER:PTHR23056:SF45	UniProt:Q75KU4	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000035065E	RefSeq:XP_015637956.1

Description

CALCINEURIN B-LIKE PROTEIN 4Similar to Calcineurin B-like protein 4 (SALT OVERLY SENSITIVE 3 protein). (Os05t0534400-01)

Coordinates

chr5:+:26535935..26537873

Molecular Weight (calculated)

23917.3 Da

IEP (calculated)

4.716

GRAVY (calculated)

-0.336

Length

210 amino acids

Sequence
(BLAST)

001: MGCASSKQFK RPPGYEEPAV LAAQTTFTVN EVEALRELYN KMSYSIIKDG LIHKEEFQLA LFRNSRKANL FADRVFDLFD LKRNGVIEFG EFVRSLSVFH
101: PKAPKSEKTA FAFKLYDLRG TGYIEKEELR EMVLALLDES DLHLSECAVE AIVDNTFSQA DSNGDGRIDP EEWEEFVKAN PASLRNMSLP YLQDITMAFP
201: SFVMHSEAHD

Best Arabidopsis Sequence Match ( AT5G24270.2 )
(BLAST)

001: MGCSVSKKKK KNAMRPPGYE DPELLASVTP FTVEEVEALY ELFKKLSSSI IDDGLIHKEE FQLALFRNRN RRNLFADRIF DVFDVKRNGV IEFGEFVRSL
101: GVFHPSAPVH EKVKFAFKLY DLRQTGFIER EELKEMVVAL LHESELVLSE DMIEVMVDKA FVQADRKNDG KIDIDEWKDF VSLNPSLIKN MTLPYLKDIN
201: RTFPSFVSSC EEEEMELQNV SS

Arabidopsis Description

CBL4Calcineurin B-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O81223]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.