Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| OQU88438 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G64480.1 | OQU88438 | AT1G30270.1 | 16814720 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0534400-01 | Rice | plasma membrane | 83.96 | 84.76 |
| TraesCS1B01G370900.1 | Wheat | mitochondrion | 83.02 | 80.73 |
| TraesCS1D01G358400.1 | Wheat | mitochondrion | 82.08 | 79.82 |
| HORVU1Hr1G080790.11 | Barley | cytosol | 72.64 | 78.97 |
| TraesCS1B01G370500.1 | Wheat | cytosol | 81.6 | 77.93 |
| TraesCS1A01G352200.1 | Wheat | cytosol | 81.6 | 77.93 |
| TraesCS1D01G358200.2 | Wheat | cytosol, plastid | 82.08 | 76.65 |
| TraesCS1B01G370800.1 | Wheat | cytosol | 78.77 | 75.23 |
| TraesCS1B01G370600.1 | Wheat | nucleus | 50.47 | 72.79 |
| GSMUA_Achr1P13790_001 | Banana | cytosol | 73.11 | 71.76 |
| GSMUA_Achr1P13780_001 | Banana | cytosol | 65.57 | 71.28 |
| EES06704 | Sorghum | cytosol | 68.87 | 68.54 |
| Zm00001d038730_P001 | Maize | cytosol | 94.34 | 64.31 |
| KXG32826 | Sorghum | cytosol | 63.68 | 61.93 |
| VIT_02s0025g01640.t01 | Wine grape | cytosol | 63.68 | 61.64 |
| HORVU1Hr1G080820.4 | Barley | cytosol, nucleus, plastid | 69.81 | 58.5 |
| AT1G64480.1 | Thale cress | cytosol, mitochondrion | 58.96 | 58.41 |
| Bra027703.1-P | Field mustard | mitochondrion | 58.49 | 57.94 |
| CDY64882 | Canola | mitochondrion | 58.49 | 57.94 |
| CDY46533 | Canola | mitochondrion | 58.49 | 57.94 |
| PGSC0003DMT400046089 | Potato | cytosol | 52.83 | 57.44 |
| EER94470 | Sorghum | cytosol | 57.55 | 57.28 |
| TraesCS4D01G162400.1 | Wheat | cytosol | 56.6 | 56.34 |
| Solyc12g055920.1.1 | Tomato | cytosol, mitochondrion | 58.49 | 54.87 |
| OQU79501 | Sorghum | cytosol | 55.66 | 52.44 |
| Solyc08g036590.1.1 | Tomato | endoplasmic reticulum, extracellular | 55.19 | 51.09 |
| EES16698 | Sorghum | cytosol | 53.3 | 50.67 |
| Solyc08g054570.1.1 | Tomato | cytosol | 42.92 | 48.92 |
| OQU84945 | Sorghum | cytosol | 18.4 | 41.49 |
| KXG33232 | Sorghum | endoplasmic reticulum | 54.25 | 40.64 |
| HORVU1Hr1G080780.4 | Barley | golgi, nucleus | 82.08 | 37.26 |
| KXG32770 | Sorghum | cytosol, plastid | 55.19 | 36.68 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:26.6.1.1.1 | UniProt:A0A1B6P9N9 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | InterPro:IPR002048 | EnsemblPlants:KXG22403 | ProteinID:KXG22403 |
| ProteinID:KXG22403.1 | PFAM:PF13202 | PFAM:PF13499 | PRINTS:PR00450 | ScanProsite:PS00018 | PFscan:PS50222 |
| PANTHER:PTHR23056 | PANTHER:PTHR23056:SF45 | SMART:SM00054 | EnsemblPlantsGene:SORBI_3009G210300 | SUPFAM:SSF47473 | UniParc:UPI0003C6922A |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:55662845..55665067
Molecular Weight (calculated)
24049.1 Da
IEP (calculated)
4.393
GRAVY (calculated)
-0.325
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCASSKQFG RSASSAHEDP AVLASQTSFT VNEVEALYEL YKKLSFSIVK DGLIHKEEFQ FALFRNSKRA NLFADRVFDL FDLKRNGVID FEEFVRSLSV
101: FHPNADTSEK TAFAFKLYDL RGTGYIEKEE LREMVLALLD ESDLCLSDST VETIVDNTFS QADSNGDGRI DPEEWEEFVK KNPATLRNMS LPYLQDITMS
201: FPSFIMHSEA SD
101: FHPNADTSEK TAFAFKLYDL RGTGYIEKEE LREMVLALLD ESDLCLSDST VETIVDNTFS QADSNGDGRI DPEEWEEFVK KNPATLRNMS LPYLQDITMS
201: FPSFIMHSEA SD
001: MGCSVSKKKK KNAMRPPGYE DPELLASVTP FTVEEVEALY ELFKKLSSSI IDDGLIHKEE FQLALFRNRN RRNLFADRIF DVFDVKRNGV IEFGEFVRSL
101: GVFHPSAPVH EKVKFAFKLY DLRQTGFIER EELKEMVVAL LHESELVLSE DMIEVMVDKA FVQADRKNDG KIDIDEWKDF VSLNPSLIKN MTLPYLKDIN
201: RTFPSFVSSC EEEEMELQNV SS
101: GVFHPSAPVH EKVKFAFKLY DLRQTGFIER EELKEMVVAL LHESELVLSE DMIEVMVDKA FVQADRKNDG KIDIDEWKDF VSLNPSLIKN MTLPYLKDIN
201: RTFPSFVSSC EEEEMELQNV SS
Arabidopsis Description
CBL4Calcineurin B-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O81223]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.