Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0480800-00 | Rice | cytosol | 51.06 | 35.29 |
| EES16698 | Sorghum | cytosol | 62.77 | 26.46 |
| OQU79501 | Sorghum | cytosol | 60.64 | 25.33 |
| EER94470 | Sorghum | cytosol | 44.68 | 19.72 |
| EES06704 | Sorghum | cytosol | 44.68 | 19.72 |
| KXG22403 | Sorghum | cytosol | 41.49 | 18.4 |
| KXG32826 | Sorghum | cytosol | 42.55 | 18.35 |
| KXG33232 | Sorghum | endoplasmic reticulum | 51.06 | 16.96 |
| KXG32770 | Sorghum | cytosol, plastid | 51.06 | 15.05 |
Protein Annotations
| EnsemblPlants:OQU84945 | EnsemblPlantsGene:SORBI_3004G146400 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23056 | PANTHER:PTHR23056:SF83 | PFAM:PF13202 |
| PFscan:PS50222 | ProteinID:OQU84945 | ProteinID:OQU84945.1 | SEG:seg | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI000B8B98EF | UniProt:A0A1Z5RN97 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:45414365..45415210
Molecular Weight (calculated)
10917.2 Da
IEP (calculated)
4.240
GRAVY (calculated)
-0.198
Length
94 amino acids
Sequence
(BLAST)
(BLAST)
1: MSWLVSMNEM EALYVLFKRI DRAAVEDDII SKLKQMMEVT FAESNLNLSN EVNEIIIDKT FEEADTKKDG KIDFEEWQSL VMAHPSLLKN MTLT
001: MSQCIDGFKH VCSSFFRCFD IDIYKQSGGL GDPELLARET VFSVSEIEAL YELFKKISSA VIDDGLINKE EFQLALFKTN KKESLFADRY QSQVFDLFDT
101: KHNGILGFEE FARALSVFHP NAPIEDKIDF SFQLYDLKQQ GFIERQEVKQ MVVATLAESG MNLSDEIIES IIDKTFEEAD TKHDGRIDKE EWRTLVLRHP
201: SLLKNMTLQY LKDITTTFPS FVFHSQVEDT
101: KHNGILGFEE FARALSVFHP NAPIEDKIDF SFQLYDLKQQ GFIERQEVKQ MVVATLAESG MNLSDEIIES IIDKTFEEAD TKHDGRIDKE EWRTLVLRHP
201: SLLKNMTLQY LKDITTTFPS FVFHSQVEDT
Arabidopsis Description
ATCBL3calcineurin B-like 3 [Source:TAIR;Acc:AT4G26570]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.