CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010931_P001	Maize	cytosol	36.24	94.05
Zm00001d044389_P001	Maize	cytosol	94.95	87.71
Os01t0598200-01	Rice	cytosol, mitochondrion	83.49	83.49
Solyc03g083320.2.1	Tomato	cytosol	64.68	65.89
PGSC0003DMT400023568	Potato	cytosol	64.68	65.89
Solyc06g051970.2.1	Tomato	cytosol	63.3	64.49
VIT_16s0098g01870.t01	Wine grape	cytosol	62.39	63.85
EES06704	Sorghum	cytosol	62.39	63.85
KXG22403	Sorghum	cytosol	61.93	63.68
PGSC0003DMT400050430	Potato	cytosol	62.39	63.55
KRH64445	Soybean	cytosol	63.76	62.33
KRH53498	Soybean	cytosol	63.76	62.33
GSMUA_Achr4P08200_001	Banana	cytosol	61.47	61.19
AT5G24270.4	Thale cress	cytosol	60.55	59.46
CDX87133	Canola	cytosol	58.72	59.26
CDY19840	Canola	cytosol	58.72	58.72
CDX80425	Canola	cytosol	58.72	57.92
Bra009743.1-P	Field mustard	cytosol	58.72	57.92
Bra026462.1-P	Field mustard	cytosol	58.26	57.47
CDY59968	Canola	cytosol, plasma membrane	57.8	57.01
Bra029396.1-P	Field mustard	cytosol	57.8	57.01
CDY44281	Canola	cytosol	56.88	56.11
EER94470	Sorghum	cytosol	51.83	53.05
OQU79501	Sorghum	cytosol	52.29	50.67
EES16698	Sorghum	cytosol	51.38	50.22
OQU84945	Sorghum	cytosol	18.35	42.55
KXG33232	Sorghum	endoplasmic reticulum	51.83	39.93
KXG32770	Sorghum	cytosol, plastid	54.13	36.99

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	UniProt:C4P7Y2	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	EMBL:FJ901261
GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005513	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006950	GO:GO:0008150	GO:GO:0009628	GO:GO:0009987
GO:GO:0019725	GO:GO:0030007	GO:GO:0042539	InterPro:IPR002048	EnsemblPlants:KXG32826	ProteinID:KXG32826
ProteinID:KXG32826.1	PFAM:PF13499	PFAM:PF13833	PRINTS:PR00450	PFscan:PS50222	PANTHER:PTHR23056
PANTHER:PTHR23056:SF45	SMART:SM00054	EnsemblPlantsGene:SORBI_3003G208400	SUPFAM:SSF47473	UniParc:UPI0001A4203F	:

Description

hypothetical protein

Coordinates

chr3:+:53959655..53964864

Molecular Weight (calculated)

25108.8 Da

IEP (calculated)

4.683

GRAVY (calculated)

-0.278

Length

218 amino acids

Sequence
(BLAST)

001: MGCLQTKHAS RSPHLLDTRE AVALAAETSF TVSEVEALHE LFRKISNSII EDNLIHKEEF HLALFRSKKK QNLFVDRVFD LFDQKRNGVI EFGEFVRSLS
101: VFHPDAPEEQ KVAFAFKLYD LRQTGFIERH ELKEMVLALL DESDLDIASD AVEMIVDRTF DQADTKGDGK IDQEEWTAYA KDNPYVLRNM TLPYLKDITM
201: VFPSFVMHSE ISETDMAV

Best Arabidopsis Sequence Match ( AT5G24270.2 )
(BLAST)

001: MGCSVSKKKK KNAMRPPGYE DPELLASVTP FTVEEVEALY ELFKKLSSSI IDDGLIHKEE FQLALFRNRN RRNLFADRIF DVFDVKRNGV IEFGEFVRSL
101: GVFHPSAPVH EKVKFAFKLY DLRQTGFIER EELKEMVVAL LHESELVLSE DMIEVMVDKA FVQADRKNDG KIDIDEWKDF VSLNPSLIKN MTLPYLKDIN
201: RTFPSFVSSC EEEEMELQNV SS

Arabidopsis Description

CBL4Calcineurin B-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O81223]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.