CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plasma membrane: 26462466

gfp PMID: 26462466 doi

WZ Liu, M Deng, L Li, B Yang, H Li, H Deng, YQ Jiang

State Key Laboratory of Crop Stress Biology for Arid Areas, College of Life Sciences, Northwest A & F University, Yangling, Shaanxi, 712100, China. Electronic address: 513768220@qq.com., State Key Laboratory of Crop Stress Biology for Arid Areas, College of Life Sciences, Northwest A & F University, Yangling, Shaanxi, 712100, China. Electronic address: 994051374@qq.com., State Key Laboratory of Crop Stress Biology for Arid Areas, College of Life Sciences, Northwest A & F University, Yangling, Shaanxi, 712100, China. Electronic address: dengmin@nwafu.edu.cn., State Key Laboratory of Crop Stress Biology for Arid Areas, College of Life Sciences, Northwest A & F University, Yangling, Shaanxi, 712100, China. Electronic address: dhqing@nwafu.edu.cn., State Key Laboratory of Crop Stress Biology for Arid Areas, College of Life Sciences, Northwest A & F University, Yangling, Shaanxi, 712100, China. Electronic address: happywuzhenliu@163.com., State Key Laboratory of Crop Stress Biology for Arid Areas, College of Life Sciences, Northwest A & F University, Yangling, Shaanxi, 712100, China. Electronic address: jiangyq@nwafu.edu.cn., State Key Laboratory of Crop Stress Biology for Arid Areas, College of Life Sciences, Northwest A & F University, Yangling, Shaanxi, 712100, China. Electronic address: yangwl@nwafu.edu.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029396.1-P	Field mustard	cytosol	100.0	100.0
CDY44281	Canola	cytosol	98.64	98.64
CDY19840	Canola	cytosol	89.14	90.37
CDX80425	Canola	cytosol	88.24	88.24
CDX87133	Canola	cytosol	85.07	87.04
VIT_16s0098g01870.t01	Wine grape	cytosol	71.04	73.71
KRH53498	Soybean	cytosol	69.68	69.06
PGSC0003DMT400050430	Potato	cytosol	66.06	68.22
KRH64445	Soybean	cytosol	68.78	68.16
Solyc06g051970.2.1	Tomato	cytosol	65.61	67.76
CDY64882	Canola	mitochondrion	59.73	61.68
CDY46533	Canola	mitochondrion	59.73	61.68
GSMUA_Achr4P08200_001	Banana	cytosol	60.63	61.19
CDY09616	Canola	cytosol	58.82	61.03
CDX90465	Canola	cytosol	58.37	60.56
CDY28977	Canola	cytosol	58.37	60.56
CDY40580	Canola	cytosol	57.92	60.09
CDY38412	Canola	cytosol	57.92	60.09
CDY69850	Canola	cytosol	57.47	59.62
CDX78784	Canola	cytosol	57.47	59.62
CDY25987	Canola	cytosol	57.47	59.62
KXG32826	Sorghum	cytosol	57.01	57.8
Os01t0598200-01	Rice	cytosol, mitochondrion	56.11	56.88
CDY64981	Canola	cytosol	54.75	53.54
CDY06547	Canola	cytosol	54.75	53.54
CDX89324	Canola	cytosol	53.39	52.21
CDX92814	Canola	cytosol	53.39	52.21
CDX94315	Canola	cytosol	53.39	52.21
CDY42728	Canola	cytosol	53.39	52.21
Zm00001d044389_P001	Maize	cytosol	55.66	52.12
CDY67196	Canola	cytosol	16.29	51.43
CDY56859	Canola	cytosol	47.51	51.22
CDY04300	Canola	cytosol	30.32	51.15
CDX92464	Canola	cytosol	47.06	50.73
CDY62266	Canola	cytosol	10.86	50.0
CDY36774	Canola	cytosol	53.39	49.58
CDY11963	Canola	cytosol	53.39	49.58
Zm00001d010931_P001	Maize	cytosol	18.55	48.81
CDX68929	Canola	cytosol, endoplasmic reticulum, mitochondrion	52.04	46.18
CDX75314	Canola	cytosol, endoplasmic reticulum	52.04	46.18
CDY45024	Canola	cytosol	51.13	45.94
CDY28278	Canola	cytosol	51.13	45.94
CDY13513	Canola	endoplasmic reticulum, nucleus, plasma membrane	44.34	45.16
CDY32236	Canola	cytosol, extracellular	46.15	44.93
CDY34452	Canola	cytosol, extracellular	45.25	44.05
CDX72384	Canola	cytosol	51.58	42.7
CDX89325	Canola	plastid	46.15	37.09
CDX94316	Canola	plastid	42.99	34.42

Protein Annotations

Gene3D:1.10.238.10	MapMan:26.6.1.1.1	EnsemblPlants:CDY59968	ProteinID:CDY59968	ProteinID:CDY59968.1	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	EnsemblPlantsGene:GSBRNA2T00027991001
InterPro:IPR002048	PFAM:PF13499	PFAM:PF13833	PRINTS:PR00450	ScanProsite:PS00018	PFscan:PS50222
PANTHER:PTHR23056	PANTHER:PTHR23056:SF45	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000254722E	GO:V9LY65
UniProt:V9LY65	SEG:seg	:	:	:	:

Description

BnaA02g37060DBnaA02g37060D protein [Source:UniProtKB/TrEMBL;Acc:V9LY65]

Coordinates

chrLK033825:-:39935..42529

Molecular Weight (calculated)

25370.5 Da

IEP (calculated)

4.507

GRAVY (calculated)

-0.180

Length

221 amino acids

Sequence
(BLAST)

001: MGCSLSKKKK IAIPPPGYED PDLLASVTPF TAAEVEVLYE LFKKLSSSII EDGLIHKEEF QLALLGNRNR NNLFADRIFD VFDVKRNGVI EFGEFVRSLG
101: VFHPNAPVHE KIKFAFKLYD LRQTGFIERE ELKEMVIALL HESELVLSED MIEVMVDKAF TETDRNNDGK IDVDEWKDLV SMNPSLIKNM TLPYLKDIKA
201: TFPSFVLSSE DEELELQNLY F

Best Arabidopsis Sequence Match ( AT5G24270.2 )
(BLAST)

001: MGCSVSKKKK KNAMRPPGYE DPELLASVTP FTVEEVEALY ELFKKLSSSI IDDGLIHKEE FQLALFRNRN RRNLFADRIF DVFDVKRNGV IEFGEFVRSL
101: GVFHPSAPVH EKVKFAFKLY DLRQTGFIER EELKEMVVAL LHESELVLSE DMIEVMVDKA FVQADRKNDG KIDIDEWKDF VSLNPSLIKN MTLPYLKDIN
201: RTFPSFVSSC EEEEMELQNV SS

Arabidopsis Description

CBL4Calcineurin B-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O81223]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.