Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67196 | Canola | cytosol | 97.92 | 67.14 |
| CDY06547 | Canola | cytosol | 95.83 | 20.35 |
| CDY64981 | Canola | cytosol | 95.83 | 20.35 |
| CDY11963 | Canola | cytosol | 95.83 | 19.33 |
| CDY36774 | Canola | cytosol | 95.83 | 19.33 |
| CDY42728 | Canola | cytosol | 85.42 | 18.14 |
| CDX94315 | Canola | cytosol | 85.42 | 18.14 |
| CDX92814 | Canola | cytosol | 85.42 | 18.14 |
| CDX89324 | Canola | cytosol | 85.42 | 18.14 |
| CDY34452 | Canola | cytosol, extracellular | 81.25 | 17.18 |
| CDY32236 | Canola | cytosol, extracellular | 81.25 | 17.18 |
| CDX90465 | Canola | cytosol | 60.42 | 13.62 |
| CDY38412 | Canola | cytosol | 60.42 | 13.62 |
| CDY09616 | Canola | cytosol | 60.42 | 13.62 |
| CDX92464 | Canola | cytosol | 56.25 | 13.17 |
| CDY56859 | Canola | cytosol | 56.25 | 13.17 |
| CDX78784 | Canola | cytosol | 58.33 | 13.15 |
| CDY13513 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 58.33 | 12.9 |
| CDY40580 | Canola | cytosol | 56.25 | 12.68 |
| CDY69850 | Canola | cytosol | 56.25 | 12.68 |
| CDY28977 | Canola | cytosol | 56.25 | 12.68 |
| CDY25987 | Canola | cytosol | 56.25 | 12.68 |
| CDY45024 | Canola | cytosol | 62.5 | 12.2 |
| CDY28278 | Canola | cytosol | 60.42 | 11.79 |
| CDY46533 | Canola | mitochondrion | 52.08 | 11.68 |
| CDY64882 | Canola | mitochondrion | 52.08 | 11.68 |
| CDX89325 | Canola | plastid | 66.67 | 11.64 |
| CDX94316 | Canola | plastid | 66.67 | 11.59 |
| CDY19840 | Canola | cytosol | 52.08 | 11.47 |
| CDX80425 | Canola | cytosol | 52.08 | 11.31 |
| CDX68929 | Canola | cytosol, endoplasmic reticulum, mitochondrion | 58.33 | 11.24 |
| CDX75314 | Canola | cytosol, endoplasmic reticulum | 58.33 | 11.24 |
| CDY59968 | Canola | cytosol, plasma membrane | 50.0 | 10.86 |
| CDX72384 | Canola | cytosol | 58.33 | 10.49 |
| CDY44281 | Canola | cytosol | 47.92 | 10.41 |
| CDX87133 | Canola | cytosol | 45.83 | 10.19 |
| CDY04300 | Canola | cytosol | 25.0 | 9.16 |
Protein Annotations
| EnsemblPlants:CDY62266 | EnsemblPlantsGene:GSBRNA2T00036124001 | Gene3D:1.10.238.10 | GO:A0A078JD44 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23056 | PANTHER:PTHR23056:SF51 |
| PFAM:PF13202 | PFscan:PS50222 | ProteinID:CDY62266 | ProteinID:CDY62266.1 | SUPFAM:SSF47473 | UniParc:UPI0004EBD7DF |
| UniProt:A0A078JD44 | MapMan:35.1 | : | : | : | : |
Description
BnaCnng39800DBnaCnng39800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JD44]
Coordinates
chrLK034122:+:34263..34488
Molecular Weight (calculated)
5677.8 Da
IEP (calculated)
5.548
GRAVY (calculated)
-0.854
Length
48 amino acids
Sequence
(BLAST)
(BLAST)
1: MNLKDTVIED IIDKTFEEAD TKHDGKIDKE DWRSLVHRHP SLLKNMTL
001: MSQCVDGIKH LCTSVLGCFD LDLYKQSGGL GDPELLARDT VFSVSEIEAL YELFKKISSA VIDDGLINKE EFQLALFKTN KKESLFADRV FDLFDTKHNG
101: ILGFEEFARA LSVFHPNAPI DDKIHFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLK DTVIEDIIDK TFEEADTKHD GKIDKEEWRS LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVEDT
101: ILGFEEFARA LSVFHPNAPI DDKIHFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLK DTVIEDIIDK TFEEADTKHD GKIDKEEWRS LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVEDT
Arabidopsis Description
CBL2Calcineurin B-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAS7]
SUBAcon: [extracellular,cytosol]
SUBAcon: [extracellular,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.