CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89324	Canola	cytosol	100.0	100.0
Bra026421.1-P	Field mustard	cytosol	96.02	99.54
CDY42728	Canola	cytosol	96.46	96.46
CDX92814	Canola	cytosol	96.46	96.46
CDY06547	Canola	cytosol	91.59	91.59
CDY64981	Canola	cytosol	91.59	91.59
Solyc07g065820.2.1	Tomato	cytosol	88.5	91.32
PGSC0003DMT400057342	Potato	cytosol, extracellular	88.05	90.87
GSMUA_Achr9P12840_001	Banana	cytosol	90.27	90.27
KRH46425	Soybean	endoplasmic reticulum	89.38	89.38
KRG98442	Soybean	cytosol	88.94	88.94
Os03t0626800-01	Rice	cytosol	88.5	88.89
CDY67196	Canola	cytosol	27.43	88.57
PGSC0003DMT400076653	Potato	cytosol	87.61	88.39
Solyc12g015870.1.1	Tomato	cytosol	87.61	88.39
Zm00001d033295_P001	Maize	cytosol	87.17	87.56
TraesCS4D01G068700.1	Wheat	cytosol	87.17	87.56
TraesCS4A01G245500.1	Wheat	cytosol	86.73	87.11
CDY11963	Canola	cytosol	91.15	86.55
PGSC0003DMT400037245	Potato	cytosol	84.96	86.49
HORVU4Hr1G011670.1	Barley	vacuole	85.84	86.22
CDY62266	Canola	cytosol	18.14	85.42
OQU79501	Sorghum	cytosol	84.96	85.33
CDY36774	Canola	cytosol	89.82	85.29
Zm00001d030955_P003	Maize	cytosol	84.51	84.89
HORVU5Hr1G016320.1	Barley	cytosol	84.51	84.89
Os12t0597000-01	Rice	plasma membrane, vacuole	84.51	84.89
TraesCS5D01G072100.1	Wheat	cytosol	84.51	84.89
TraesCS5B01G071500.1	Wheat	cytosol	84.51	84.89
TraesCS5A01G060600.1	Wheat	cytosol	84.51	84.89
Zm00001d041392_P001	Maize	cytosol, extracellular	61.06	80.7
TraesCS4B01G069900.1	Wheat	cytosol	80.53	70.0
CDY34452	Canola	cytosol, extracellular	69.47	69.16
CDY32236	Canola	cytosol, extracellular	68.14	67.84
CDX90465	Canola	cytosol	57.96	61.5
CDY09616	Canola	cytosol	57.52	61.03
CDY38412	Canola	cytosol	57.08	60.56
CDX78784	Canola	cytosol	57.08	60.56
CDY40580	Canola	cytosol	56.64	60.09
CDX89325	Canola	plastid	73.01	60.0
CDY28977	Canola	cytosol	56.19	59.62
CDY69850	Canola	cytosol	55.75	59.15
CDY25987	Canola	cytosol	55.75	59.15
Zm00001d041393_P001	Maize	extracellular	27.43	57.41
CDY04300	Canola	cytosol	32.74	56.49
CDY19840	Canola	cytosol	53.98	55.96
CDX94316	Canola	plastid	67.26	55.07
CDX80425	Canola	cytosol	53.54	54.75
CDY44281	Canola	cytosol	52.65	53.85
CDX87133	Canola	cytosol	51.33	53.7
CDY59968	Canola	cytosol, plasma membrane	52.21	53.39
CDY28278	Canola	cytosol	57.96	53.25
CDX68929	Canola	cytosol, endoplasmic reticulum, mitochondrion	57.96	52.61
CDX75314	Canola	cytosol, endoplasmic reticulum	57.96	52.61
CDY45024	Canola	cytosol	57.08	52.44
CDY64882	Canola	mitochondrion	49.12	51.87
CDY46533	Canola	mitochondrion	49.12	51.87
CDY13513	Canola	endoplasmic reticulum, nucleus, plasma membrane	48.67	50.69
CDX72384	Canola	cytosol	57.96	49.06
CDY56859	Canola	cytosol	42.48	46.83
CDX92464	Canola	cytosol	41.15	45.37
VIT_00s0194g00040.t01	Wine grape	cytosol	18.14	10.12

Protein Annotations

EnsemblPlants:CDX94315	EnsemblPlantsGene:GSBRNA2T00157416001	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
GO:V9LYK2	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR23056	PANTHER:PTHR23056:SF51
PFAM:PF13499	PFAM:PF13833	PFscan:PS50222	ProteinID:CDX94315	ProteinID:CDX94315.1	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI0003D85513	UniProt:V9LYK2	MapMan:35.1	:	:

Description

BnaC01g18690DBnaA01g15690D protein [Source:UniProtKB/TrEMBL;Acc:V9LYK2]

Coordinates

chrLK031881:+:178135..180749

Molecular Weight (calculated)

25784.6 Da

IEP (calculated)

4.541

GRAVY (calculated)

-0.227

Length

226 amino acids

Sequence
(BLAST)

001: MSQCVDGFKH VCNSLLRCFD IDIGKSSGGP GDPELLARDT VFSVSEIEAL YELFKKISSA VIDDGLINKE EFQLALFKTN KKESLFADRV FDLFDTKHNG
101: ILGFEEFARA LSVFHPNAPI DDKIDFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLS DEVIESIIDK TFEEADTKHD GRIDKEEWRI LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVEDT

Best Arabidopsis Sequence Match ( AT4G26570.1 )
(BLAST)

001: MSQCIDGFKH VCSSFFRCFD IDIYKQSGGL GDPELLARET VFSVSEIEAL YELFKKISSA VIDDGLINKE EFQLALFKTN KKESLFADRV FDLFDTKHNG
101: ILGFEEFARA LSVFHPNAPI EDKIDFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLS DEIIESIIDK TFEEADTKHD GRIDKEEWRT LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVEDT

Arabidopsis Description

ATCBL3calcineurin B-like 3 [Source:TAIR;Acc:AT4G26570]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.