Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400076653 | Potato | cytosol | 91.89 | 91.07 |
| PGSC0003DMT400057342 | Potato | cytosol, extracellular | 87.84 | 89.04 |
| KRH46425 | Soybean | endoplasmic reticulum | 89.19 | 87.61 |
| KRG98442 | Soybean | cytosol | 89.19 | 87.61 |
| GSMUA_Achr9P12840_001 | Banana | cytosol | 88.74 | 87.17 |
| Os03t0626800-01 | Rice | cytosol | 88.29 | 87.11 |
| TraesCS4D01G068700.1 | Wheat | cytosol | 87.84 | 86.67 |
| TraesCS4A01G245500.1 | Wheat | cytosol | 87.84 | 86.67 |
| Zm00001d033295_P001 | Maize | cytosol | 87.39 | 86.22 |
| CDX92814 | Canola | cytosol | 87.39 | 85.84 |
| CDY42728 | Canola | cytosol | 87.39 | 85.84 |
| CDY67196 | Canola | cytosol | 27.03 | 85.71 |
| AT5G55990.1 | Thale cress | cytosol, extracellular | 86.94 | 85.4 |
| TraesCS5A01G060600.1 | Wheat | cytosol | 86.49 | 85.33 |
| TraesCS5B01G071500.1 | Wheat | cytosol | 86.49 | 85.33 |
| TraesCS5D01G072100.1 | Wheat | cytosol | 86.49 | 85.33 |
| HORVU4Hr1G011670.1 | Barley | vacuole | 86.49 | 85.33 |
| HORVU5Hr1G016320.1 | Barley | cytosol | 86.49 | 85.33 |
| CDX94315 | Canola | cytosol | 86.49 | 84.96 |
| CDX89324 | Canola | cytosol | 86.49 | 84.96 |
| Os12t0597000-01 | Rice | plasma membrane, vacuole | 85.59 | 84.44 |
| Bra026421.1-P | Field mustard | cytosol | 82.88 | 84.4 |
| AT4G26570.2 | Thale cress | cytosol | 87.39 | 84.35 |
| OQU79501 | Sorghum | cytosol | 85.14 | 84.0 |
| Zm00001d030955_P003 | Maize | cytosol | 85.14 | 84.0 |
| Bra035598.1-P | Field mustard | cytosol | 85.14 | 83.63 |
| CDY06547 | Canola | cytosol | 85.14 | 83.63 |
| CDY64981 | Canola | cytosol | 85.14 | 83.63 |
| CDY11963 | Canola | cytosol | 85.59 | 79.83 |
| Bra028949.1-P | Field mustard | cytosol | 78.38 | 79.09 |
| CDY36774 | Canola | cytosol | 84.68 | 78.99 |
| Zm00001d041392_P001 | Maize | cytosol, extracellular | 60.36 | 78.36 |
| PGSC0003DMT400088667 | Potato | cytosol | 70.72 | 70.09 |
| TraesCS4B01G069900.1 | Wheat | cytosol | 81.53 | 69.62 |
| PGSC0003DMT400011576 | Potato | cytosol | 59.91 | 62.44 |
| PGSC0003DMT400068352 | Potato | cytosol | 59.46 | 61.4 |
| PGSC0003DMT400023568 | Potato | cytosol | 57.21 | 59.35 |
| PGSC0003DMT400050430 | Potato | cytosol | 54.95 | 57.01 |
| CDX89325 | Canola | plastid | 70.27 | 56.73 |
| PGSC0003DMT400014960 | Potato | cytosol | 28.83 | 53.78 |
| CDX94316 | Canola | plastid | 65.77 | 52.9 |
| PGSC0003DMT400046089 | Potato | cytosol | 46.4 | 52.82 |
| Bra026422.1-P | Field mustard | cytosol, plastid | 59.46 | 52.8 |
| PGSC0003DMT400052805 | Potato | cytosol | 53.6 | 45.59 |
| PGSC0003DMT400014962 | Potato | cytosol | 18.92 | 42.86 |
| PGSC0003DMT400076980 | Potato | mitochondrion | 54.5 | 41.72 |
| VIT_00s0194g00040.t01 | Wine grape | cytosol | 17.12 | 9.38 |
Protein Annotations
| Gene3D:1.10.238.10 | EntrezGene:102605316 | MapMan:35.1 | InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005509 | InterPro:IPR002048 | UniProt:M1B524 | PFAM:PF13499 | PFAM:PF13833 |
| EnsemblPlantsGene:PGSC0003DMG400014370 | PGSC:PGSC0003DMG400014370 | EnsemblPlants:PGSC0003DMT400037245 | PRINTS:PR00450 | PFscan:PS50222 | PANTHER:PTHR23056 |
| PANTHER:PTHR23056:SF57 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI000294DEE3 | RefSeq:XP_015166459.1 | RefSeq:XP_015166460.1 |
| RefSeq:XP_015166461.1 | : | : | : | : | : |
Description
Calcineurin B 02 [Source:PGSC_GENE;Acc:PGSC0003DMG400014370]
Coordinates
chr10:+:891795..897681
Molecular Weight (calculated)
25517.3 Da
IEP (calculated)
4.628
GRAVY (calculated)
-0.280
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MSYCFEGIKH LGASLSKCCE RQSTGLEDPE ILARETVFSV SEIEALYELF EKISSAVIDD GLINKEEFQL ALFKTSKKES LFADRVFDLF DTKHNGLLGF
101: EEFARALSVF HPNAPIDDKI EFSFQLYDLK HQGFIERQEV KQMVVATLAE TGMNLSDEII ESIIDKTFEE ADTKHDGKID KEEWRNLVMR HPSLLKNMTL
201: QYLKDITTTF PSFVFHSRVP DT
101: EEFARALSVF HPNAPIDDKI EFSFQLYDLK HQGFIERQEV KQMVVATLAE TGMNLSDEII ESIIDKTFEE ADTKHDGKID KEEWRNLVMR HPSLLKNMTL
201: QYLKDITTTF PSFVFHSRVP DT
001: MSQCIDGFKH VCSSFFRCFD IDIYKQSGGL GDPELLARET VFSVSEIEAL YELFKKISSA VIDDGLINKE EFQLALFKTN KKESLFADRV FDLFDTKHNG
101: ILGFEEFARA LSVFHPNAPI EDKIDFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLS DEIIESIIDK TFEEADTKHD GRIDKEEWRT LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVEDT
101: ILGFEEFARA LSVFHPNAPI EDKIDFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLS DEIIESIIDK TFEEADTKHD GRIDKEEWRT LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVEDT
Arabidopsis Description
ATCBL3calcineurin B-like 3 [Source:TAIR;Acc:AT4G26570]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.