Factsheet for PGSC0003DMT400088667

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g032310.1.1	Tomato	cytosol	87.95	89.95
PGSC0003DMT400057342	Potato	cytosol, extracellular	75.45	77.17
PGSC0003DMT400076653	Potato	cytosol	72.77	72.77
VIT_19s0015g01070.t01	Wine grape	extracellular	72.77	72.12
PGSC0003DMT400037245	Potato	cytosol	70.09	70.72
PGSC0003DMT400011576	Potato	cytosol	52.23	54.93
PGSC0003DMT400068352	Potato	cytosol	51.79	53.95
PGSC0003DMT400014960	Potato	cytosol	27.68	52.1
PGSC0003DMT400023568	Potato	cytosol	49.55	51.87
PGSC0003DMT400050430	Potato	cytosol	49.11	51.4
PGSC0003DMT400046089	Potato	cytosol	42.41	48.72
PGSC0003DMT400014962	Potato	cytosol	18.75	42.86
PGSC0003DMT400052805	Potato	cytosol	46.88	40.23
PGSC0003DMT400076980	Potato	mitochondrion	48.66	37.59

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:102588983	MapMan:35.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	InterPro:IPR002048	UniProt:M1DGG7	PFAM:PF13202
PFAM:PF13833	EnsemblPlantsGene:PGSC0003DMG400038238	PGSC:PGSC0003DMG400038238	EnsemblPlants:PGSC0003DMT400088667	ScanProsite:PS00018	PFscan:PS50222
PANTHER:PTHR23056	PANTHER:PTHR23056:SF51	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000296CD48	RefSeq:XP_006363609.1

Description

Calcineurin B [Source:PGSC_GENE;Acc:PGSC0003DMG400038238]

Coordinates

chr2:+:16010030..16010704

Molecular Weight (calculated)

25904.9 Da

IEP (calculated)

4.391

GRAVY (calculated)

-0.157

Length

224 amino acids

Sequence
(BLAST)

001: MLSCLGSYLS RFCNIDFGQS ADLDDVDILA RETVFRVNEI EALYELFKKI SSAGIGDGLI MNRKEFQLAI YNTNAKENFF ADRVFDLFDT KRKGILGFKE
101: FACALSIFHP NAAIDDKIEF SFQLYDIKQQ GFIERQEVKQ MMLVALAETN MKLSDNVIES IIDHTFEEAD TNRDGKIDKE EWRSLVLRNP SLLQNMTLPY
201: LTDITTMFPS FVFHSRVEDD LIWD

Best Arabidopsis Sequence Match ( AT4G26570.1 )
(BLAST)

001: MSQCIDGFKH VCSSFFRCFD IDIYKQSGGL GDPELLARET VFSVSEIEAL YELFKKISSA VIDDGLINKE EFQLALFKTN KKESLFADRV FDLFDTKHNG
101: ILGFEEFARA LSVFHPNAPI EDKIDFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLS DEIIESIIDK TFEEADTKHD GRIDKEEWRT LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVEDT

Arabidopsis Description

ATCBL3calcineurin B-like 3 [Source:TAIR;Acc:AT4G26570]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.