Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plasma membrane 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
27664331
|
msms PMID:
27664331
doi
Departament de Biologia Vegetal, Facultat de Farmàcia, Universitat de València, Burjassot, Valencia, Spain., Grupo de Ciencias de la Alimentación Basada en la Evidencia y Experimentación (CiAlBEx), Instituto de Ciencias de los Materiales, Parque Científico, Universitat de València, Paterna, Spain; Unidad Mixta de Investigación en Endocrinología, Nutrición y Dietética Clínica, Instituto de Investigación Sanitaria La Fe-Universitat de València, Valencia, Spain., Unidad Mixta de Investigación en Endocrinología, Nutrición y Dietética Clínica, Instituto de Investigación Sanitaria La Fe-Universitat de València, Valencia, Spain; Àrea de Parasitologia, Departament de Farmàcia i Tecnologia Farmacèutica i Parasitologia, Universitat de València, Burjassot, Valencia, Spain. Electronic address: antonio.marcilla@uv.es.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s1569g00020.t01 | Wine grape | cytosol | 80.09 | 98.37 |
| PGSC0003DMT400088667 | Potato | cytosol | 72.12 | 72.77 |
| Solyc02g032310.1.1 | Tomato | cytosol | 68.58 | 70.78 |
| VIT_02s0236g00140.t01 | Wine grape | cytosol | 60.18 | 63.85 |
| VIT_02s0236g00150.t01 | Wine grape | cytosol | 61.06 | 61.88 |
| VIT_02s0025g01640.t01 | Wine grape | cytosol | 57.08 | 58.9 |
| VIT_16s0098g01870.t01 | Wine grape | cytosol | 55.31 | 58.69 |
| VIT_04s0008g00950.t01 | Wine grape | cytosol, endoplasmic reticulum, mitochondrion, plastid | 60.62 | 53.1 |
| VIT_04s0008g00960.t01 | Wine grape | plastid | 58.85 | 52.99 |
| VIT_02s0025g01630.t01 | Wine grape | cytosol | 52.21 | 44.87 |
| VIT_00s0194g00040.t01 | Wine grape | cytosol | 19.03 | 10.62 |
Protein Annotations
| Gene3D:1.10.238.10 | EntrezGene:100262221 | wikigene:100262221 | EntrezGene:100266945 | wikigene:100266945 | MapMan:35.1 |
| UniProt:A5BYS8 | ProteinID:ACQ83556 | ProteinID:ACQ83556.1 | ProteinID:ACQ83557 | ProteinID:ACQ83557.1 | EMBL:AM426751 |
| EMBL:AM476077 | ProteinID:CAN62487 | ProteinID:CAN62487.1 | ProteinID:CAN72862 | ProteinID:CAN72862.1 | ProteinID:CBI39791 |
| ProteinID:CBI39791.3 | EntrezGene:CBL02 | wikigene:CBL02 | EntrezGene:CBL03 | wikigene:CBL03 | InterPro:EF-hand-dom_pair |
| InterPro:EF_hand_dom | EMBL:FJ901268 | EMBL:FJ901269 | EMBL:FN596747 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:IPR002048 | RefSeq:NP_001268159.1 | PFAM:PF13499 | PFAM:PF13833 | PRINTS:PR00450 |
| PFscan:PS50222 | PANTHER:PTHR23056 | PANTHER:PTHR23056:SF51 | SMART:SM00054 | SUPFAM:SSF47473 | TIGR:TC63577 |
| UniParc:UPI00015220F0 | ArrayExpress:VIT_19s0015g01070 | EnsemblPlantsGene:VIT_19s0015g01070 | EnsemblPlants:VIT_19s0015g01070.t01 | RefSeq:XP_010644546.1 | : |
Description
Calcineurin B-like protein 02 [Source:UniProtKB/TrEMBL;Acc:A5BYS8]
Coordinates
chr19:+:9147637..9157623
Molecular Weight (calculated)
26011.0 Da
IEP (calculated)
4.546
GRAVY (calculated)
-0.215
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MLQCLEGFKH LIASLLRCCD LDLYNQARGL QDPEVLARET VFSVSEIEAL YELFKKISSA VIDDGLINKE EFQLALFKTN KKESLFADRV FDLFDTKHNG
101: ILGFEEFARA LSVFHPNAPI DDKIEFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLS DDVIESIIDK TFEEADTKHD GKIDKEEWRS LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVDDT
101: ILGFEEFARA LSVFHPNAPI DDKIEFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLS DDVIESIIDK TFEEADTKHD GKIDKEEWRS LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVDDT
001: MSQCIDGFKH VCSSFFRCFD IDIYKQSGGL GDPELLARET VFSVSEIEAL YELFKKISSA VIDDGLINKE EFQLALFKTN KKESLFADRV FDLFDTKHNG
101: ILGFEEFARA LSVFHPNAPI EDKIDFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLS DEIIESIIDK TFEEADTKHD GRIDKEEWRT LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVEDT
101: ILGFEEFARA LSVFHPNAPI EDKIDFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLS DEIIESIIDK TFEEADTKHD GRIDKEEWRT LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVEDT
Arabidopsis Description
ATCBL3calcineurin B-like 3 [Source:TAIR;Acc:AT4G26570]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.