Factsheet for VIT_02s0025g01630.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
plasma membrane 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_02s0025g01630.t01
VIT_05s0020g00830.t01
VIT_05s0020g04570.t01
VIT_06s0004g07830.t01
VIT_06s0004g07870.t01
VIT_08s0058g01090.t01
VIT_10s0003g04020.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01420.1	VIT_10s0003g04020.t01	AT1G30270.1	16814720
AT4G01420.1	VIT_06s0004g07870.t01	AT2G30360.1	11230129
AT4G01420.1	VIT_05s0020g00830.t01	AT3G17510.1	11230129
AT4G01420.1	VIT_05s0020g04570.t01	AT3G23000.1	11230129
AT4G01420.1	VIT_02s0025g01630.t01	AT4G01420.1	11402167
AT4G01420.1	VIT_08s0058g01090.t01	AT5G01820.1	11230129
AT4G01420.1	VIT_06s0004g07830.t01	AT5G07070.1	11230129

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400014960	Potato	cytosol	29.66	65.55
VIT_00s1569g00020.t01	Wine grape	cytosol	42.97	61.41
VIT_16s0098g01870.t01	Wine grape	cytosol	49.43	61.03
VIT_02s0025g01640.t01	Wine grape	cytosol	49.05	58.9
PGSC0003DMT400014962	Potato	cytosol	21.67	58.16
KRH60052	Soybean	cytosol	49.81	56.96
KRH41326	Soybean	cytosol	48.67	54.47
VIT_02s0236g00140.t01	Wine grape	cytosol	43.73	53.99
Bra002301.1-P	Field mustard	cytosol	22.05	52.73
VIT_19s0015g01070.t01	Wine grape	extracellular	44.87	52.21
VIT_02s0236g00150.t01	Wine grape	cytosol	43.73	51.57
AT4G01420.1	Thale cress	cytosol	39.16	50.74
CDY56859	Canola	cytosol	39.54	50.73
CDX92464	Canola	cytosol	38.78	49.76
VIT_04s0008g00950.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plastid	46.77	47.67
VIT_04s0008g00960.t01	Wine grape	plastid	43.35	45.42
VIT_00s0194g00040.t01	Wine grape	cytosol	10.65	6.91

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:100249564	wikigene:100249564	MapMan:35.1	ProteinID:ACQ83559	ProteinID:ACQ83559.1
ProteinID:CBI34499	ProteinID:CBI34499.3	EntrezGene:CBL05	wikigene:CBL05	UniProt:D7TVH4	InterPro:EF-hand-dom_pair
InterPro:EF_hand_dom	EMBL:FJ901271	EMBL:FN596251	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:IPR002048	PFAM:PF13499	PFAM:PF13833	PRINTS:PR00450	PFscan:PS50222	PANTHER:PTHR23056
PANTHER:PTHR23056:SF85	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0001BE4037	ArrayExpress:VIT_02s0025g01630	EnsemblPlantsGene:VIT_02s0025g01630
EnsemblPlants:VIT_02s0025g01630.t01	unigene:Vvi.25986	:	:	:	:

Description

No Description!

Coordinates

chr2:-:1576333..1578897

Molecular Weight (calculated)

30094.9 Da

IEP (calculated)

4.691

GRAVY (calculated)

-0.143

Length

263 amino acids

Sequence
(BLAST)

001: MILFSRLHQL ADSIHSLDRT SPNFSFFNSE SCVRYIVFSL YSLTSDAIPS QKKVFLMGCA CMKQRQERKS AVLLAAQTCF KVADVEALYE LFRKLSSSVV
101: DDGLISKDEF RLGLFRNSKK QSLLADRIFN LFDLKHDGMI EFGEFIRSLS IFHPDAPQEE KIAFAFQLYN TGQTGFIEHE EVREMVFAFL NESDLILSDD
201: LVEAIIDKTF SEVDTKGDGK IDPEEWNEFI SRNPSILKNM TIPYLKDIGT SFPSFVLRSD PED

Best Arabidopsis Sequence Match ( AT4G26570.1 )
(BLAST)

001: MSQCIDGFKH VCSSFFRCFD IDIYKQSGGL GDPELLARET VFSVSEIEAL YELFKKISSA VIDDGLINKE EFQLALFKTN KKESLFADRV FDLFDTKHNG
101: ILGFEEFARA LSVFHPNAPI EDKIDFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLS DEIIESIIDK TFEEADTKHD GRIDKEEWRT LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVEDT

Arabidopsis Description

ATCBL3calcineurin B-like 3 [Source:TAIR;Acc:AT4G26570]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.