Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH41326 | Soybean | cytosol | 89.13 | 87.23 |
| PGSC0003DMT400014960 | Potato | cytosol | 33.04 | 63.87 |
| Bra002301.1-P | Field mustard | cytosol | 26.96 | 56.36 |
| KRH53498 | Soybean | cytosol | 52.61 | 54.26 |
| KRH64445 | Soybean | cytosol | 51.74 | 53.36 |
| PGSC0003DMT400014962 | Potato | cytosol | 22.61 | 53.06 |
| AT4G01420.1 | Thale cress | cytosol | 46.52 | 52.71 |
| KRH01928 | Soybean | cytosol | 51.74 | 52.65 |
| KRG98442 | Soybean | cytosol | 51.3 | 52.21 |
| KRH51220 | Soybean | endoplasmic reticulum | 51.3 | 52.21 |
| KRH46425 | Soybean | endoplasmic reticulum | 51.3 | 52.21 |
| CDX92464 | Canola | cytosol | 46.52 | 52.2 |
| CDY56859 | Canola | cytosol | 46.52 | 52.2 |
| KRH57533 | Soybean | mitochondrion | 47.39 | 51.17 |
| KRH28207 | Soybean | cytosol | 46.52 | 50.47 |
| VIT_02s0025g01630.t01 | Wine grape | cytosol | 56.96 | 49.81 |
| KRH04244 | Soybean | cytosol | 46.96 | 49.32 |
| KRH36643 | Soybean | cytosol | 47.39 | 48.23 |
| KRH05482 | Soybean | cytosol, plasma membrane, plastid | 46.52 | 41.47 |
| KRH44162 | Soybean | cytosol, extracellular | 46.52 | 40.38 |
| KRH47134 | Soybean | cytosol | 45.22 | 39.54 |
Protein Annotations
| EMBL:ACUP02003347 | EnsemblPlants:KRH60052 | EnsemblPlantsGene:GLYMA_05G217700 | EntrezGene:100808628 | Gene3D:1.10.238.10 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23056 |
| PANTHER:PTHR23056:SF85 | PFAM:PF13202 | PFscan:PS50222 | PRINTS:PR00450 | ProteinID:KRH60052 | ProteinID:KRH60052.1 |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI00023396BE | UniProt:K7KRW8 | MapMan:35.1 | : |
Description
hypothetical protein
Coordinates
chr5:-:39770220..39774659
Molecular Weight (calculated)
26091.9 Da
IEP (calculated)
4.588
GRAVY (calculated)
-0.233
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCCCTKQRV DHKDPAVLAS QTYFNISEIE ALYDLFKKLS SSIIHDGVIS KEEFQLGLFG SSEKRSLFAD RVFQLFDSKN DGVIEFGEFV KALSVFHPAA
101: PQAQKADFAF RLYDISQRGF IERGEVREMI LALLNESDLV LCHDIIEVII DKTFEESDSK GDGRIDPEEW QEFVARNPSL LLRNMTIPYL KDLTTQFPSF
201: KLTSGIEDCT SSSSTEKDII LEGQVQRCQH
101: PQAQKADFAF RLYDISQRGF IERGEVREMI LALLNESDLV LCHDIIEVII DKTFEESDSK GDGRIDPEEW QEFVARNPSL LLRNMTIPYL KDLTTQFPSF
201: KLTSGIEDCT SSSSTEKDII LEGQVQRCQH
001: MSQCIDGFKH VCSSFFRCFD IDIYKQSGGL GDPELLARET VFSVSEIEAL YELFKKISSA VIDDGLINKE EFQLALFKTN KKESLFADRV FDLFDTKHNG
101: ILGFEEFARA LSVFHPNAPI EDKIDFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLS DEIIESIIDK TFEEADTKHD GRIDKEEWRT LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVEDT
101: ILGFEEFARA LSVFHPNAPI EDKIDFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLS DEIIESIIDK TFEEADTKHD GRIDKEEWRT LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVEDT
Arabidopsis Description
ATCBL3calcineurin B-like 3 [Source:TAIR;Acc:AT4G26570]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.