CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG98442
KRH41326
KRH46425
KRH60052

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23000.1	KRH41326	AT4G01420.1	11230129
AT3G23000.1	KRH60052	AT4G01420.1	11230129
AT3G23000.1	KRG98442	AT5G55990.1	11230129
AT3G23000.1	KRH46425	AT5G55990.1	11230129
AT3G23000.1	KRG98442	AT5G55990.1	14730130
AT3G23000.1	KRH46425	AT5G55990.1	14730130
AT4G14580.1	KRG98442	AT5G55990.1	11230129
AT4G14580.1	KRH46425	AT5G55990.1	11230129

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34366	Soybean	cytosol, mitochondrion, nucleus, plastid	90.37	90.16
KRH31632	Soybean	plastid	66.97	67.75
Bra036870.1-P	Field mustard	cytosol	40.37	64.23
Bra023777.1-P	Field mustard	cytosol	56.65	59.66
VIT_05s0020g04570.t01	Wine grape	mitochondrion, nucleus	57.34	59.52
CDY35487	Canola	cytosol	55.96	58.94
CDY40835	Canola	cytosol	55.73	58.7
Bra033893.1-P	Field mustard	cytosol	56.65	58.53
CDY10690	Canola	cytosol	56.88	58.49
AT4G14580.1	Thale cress	cytosol	57.11	58.45
CDY10342	Canola	cytosol, nucleus, plastid	56.65	58.12
Solyc09g083090.2.1	Tomato	cytosol	51.15	57.47
CDY29745	Canola	cytosol, nucleus, plastid	56.42	56.94
AT3G23000.1	Thale cress	plastid	55.73	56.64
PGSC0003DMT400015582	Potato	cytosol, peroxisome	56.88	56.62
Solyc09g083100.1.1	Tomato	cytosol	55.5	55.76
CDY29744	Canola	plastid	55.05	53.22
PGSC0003DMT400034837	Potato	cytosol	52.29	52.66
CDY16275	Canola	plastid	55.96	51.59
Solyc03g005330.1.1	Tomato	cytosol	50.46	51.4
EES17341	Sorghum	cytosol	48.39	48.51
Bra036868.1-P	Field mustard	plastid	54.36	48.37
CDY16278	Canola	plastid	53.67	48.35
Zm00001d041422_P001	Maize	cytosol	44.5	47.43
HORVU5Hr1G093660.1	Barley	cytosol, mitochondrion, plastid	46.79	47.33
TraesCS5D01G387900.1	Wheat	mitochondrion	46.79	47.33
TraesCS5A01G377900.1	Wheat	mitochondrion	46.79	47.33
TraesCS5B01G381500.1	Wheat	mitochondrion	46.79	47.33
KXG37976	Sorghum	cytosol, mitochondrion, plastid	46.33	46.87
TraesCS5A01G057400.1	Wheat	cytosol	46.33	46.65
TraesCS5B01G059300.1	Wheat	mitochondrion	46.1	46.53
Zm00001d033316_P001	Maize	cytosol	45.64	46.39
GSMUA_Achr6P23040_001	Banana	mitochondrion	38.76	46.3
TraesCS5D01G068700.1	Wheat	cytosol	45.87	46.19
HORVU5Hr1G014200.1	Barley	cytosol	45.64	45.96
Os03t0634400-01	Rice	cytosol, mitochondrion	46.79	45.64
TraesCS3A01G446800.1	Wheat	mitochondrion	44.27	44.68
TraesCS3B01G482200.1	Wheat	mitochondrion	44.04	44.44
TraesCS3D01G439400.1	Wheat	mitochondrion	43.81	44.21
GSMUA_Achr2P17540_001	Banana	cytosol, plasma membrane, plastid	45.18	40.62
KRH08281	Soybean	cytosol	16.51	34.12
Os12t0603700-00	Rice	cytosol	30.28	30.07

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:100811834	MapMan:18.4.5.3	Gene3D:3.30.310.80	EMBL:ACUP02012757	EnsemblPlantsGene:GLYMA_20G210800	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	UniProt:I1NIA9
InterPro:IPR000719	InterPro:IPR018451	EnsemblPlants:KRG92436	ProteinID:KRG92436	ProteinID:KRG92436.1	InterPro:Kinase-like_dom_sf
InterPro:NAF/FISL_domain	InterPro:NAF_dom	PFAM:PF00069	PFAM:PF03822	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816	PANTHER:PTHR24343	PANTHER:PTHR24343:SF102	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233DC44	SEG:seg

Description

hypothetical protein

Coordinates

chr20:-:44726531..44728221

Molecular Weight (calculated)

48619.8 Da

IEP (calculated)

9.687

GRAVY (calculated)

-0.237

Length

436 amino acids

Sequence
(BLAST)

001: MEPPSQQQPP QPPSRTATIL GKYQLTRFLG RGSFAKVYQG RSLVDGAAVA VKIIDKSKTV DAGMEPRIIR EIDAMRRLHH HPNILKIHEV LATKTKIHLV
101: VELAAGGELF AKISRRGKLP ESTARRYFQQ LVSALRFCHR NGVAHRDLKP QNLLLDGDGN LKVSDFGLSA LPEQLKNGLL HTACGTPAYT APEILRQSGG
201: YDGSKADAWS CGLILYVFLA GHLPFEDTNI PAMCKKISRR DYKFPEWISK PARFVIHKLL DPNPETRISL EALFGNAWFK KSLKPETAEE NALGFSYVKS
301: SYNYEGSKSS GVTAFDIISM SWGLDLTRLF ETKWDSGSKR EKRFTSSARV EVVEEKVKEV GGLLGFKVEV GKSNGAIALL KGKVALVFEL LEIVPHQLLL
401: VAVKVLEGAL EFEELHWGDW KHALQDLVLS WHNQES

Best Arabidopsis Sequence Match ( AT4G14580.1 )
(BLAST)

001: MESPYPKSPE KITGTVLLGK YELGRRLGSG SFAKVHVARS ISTGELVAIK IIDKQKTIDS GMEPRIIREI EAMRRLHNHP NVLKIHEVMA TKSKIYLVVE
101: YAAGGELFTK LIRFGRLNES AARRYFQQLA SALSFCHRDG IAHRDVKPQN LLLDKQGNLK VSDFGLSALP EHRSNNGLLH TACGTPAYTA PEVIAQRGYD
201: GAKADAWSCG VFLFVLLAGY VPFDDANIVA MYRKIHKRDY RFPSWISKPA RSIIYKLLDP NPETRMSIEA VMGTVWFQKS LEISEFQSSV FELDRFLEKE
301: AKSSNAITAF DLISLSSGLD LSGLFERRKR KEKRFTARVS AERVVEKAGM IGEKLGFRVE KKEETKVVGL GKGRTAVVVE VVEFAEGLVV ADVKVVVEGE
401: EEEEEVESHW SELIVELEEI VLSWHN

Arabidopsis Description

CIPK4CBL-interacting serine/threonine-protein kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUL7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.