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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • plastid 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
OQU79501

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G23000.1 OQU79501 AT5G55990.1 11230129
AT3G23000.1 OQU79501 AT5G55990.1 14730130
AT4G14580.1 OQU79501 AT5G55990.1 11230129
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d041422_P001 Maize cytosol 82.3 87.53
KXG37976 Sorghum cytosol, mitochondrion, plastid 76.55 77.26
TraesCS5B01G059300.1 Wheat mitochondrion 75.86 76.39
TraesCS5D01G068700.1 Wheat cytosol 75.86 76.21
HORVU5Hr1G014200.1 Barley cytosol 75.4 75.75
TraesCS5A01G057400.1 Wheat cytosol 74.71 75.06
TraesCS3D01G439400.1 Wheat mitochondrion 69.89 70.37
TraesCS3A01G446800.1 Wheat mitochondrion 69.89 70.37
TraesCS3B01G482200.1 Wheat mitochondrion 69.2 69.68
GSMUA_Achr6P23040_001 Banana mitochondrion 46.44 55.34
Bra036870.1-P Field mustard cytosol 34.71 55.11
VIT_05s0020g04570.t01 Wine grape mitochondrion, nucleus 51.95 53.81
CDY10690 Canola cytosol 49.66 50.94
Bra033893.1-P Field mustard cytosol 49.2 50.71
CDY40835 Canola cytosol 47.82 50.24
CDY10342 Canola cytosol, nucleus, plastid 48.97 50.12
Solyc09g083090.2.1 Tomato cytosol 44.6 50.0
Bra023777.1-P Field mustard cytosol 47.59 50.0
AT4G14580.1 Thale cress cytosol 48.74 49.77
CDY35487 Canola cytosol 47.36 49.76
PGSC0003DMT400015582 Potato cytosol, peroxisome 49.89 49.54
Solyc09g083100.1.1 Tomato cytosol 49.2 49.31
AT3G23000.1 Thale cress plastid 48.28 48.95
KRH31632 Soybean plastid 48.28 48.72
CDY29745 Canola cytosol, nucleus, plastid 48.28 48.61
KRH34366 Soybean cytosol, mitochondrion, nucleus, plastid 48.74 48.51
KRG92436 Soybean plastid 48.51 48.39
GSMUA_Achr2P17540_001 Banana cytosol, plasma membrane, plastid 52.41 47.01
PGSC0003DMT400034837 Potato cytosol 45.75 45.96
Solyc03g005330.1.1 Tomato cytosol 44.83 45.56
CDY29744 Canola plastid 46.21 44.57
CDY16275 Canola plastid 48.05 44.19
Os12t0603700-00 Rice cytosol 44.14 43.74
CDY16278 Canola plastid 46.21 41.53
Bra036868.1-P Field mustard plastid 45.98 40.82
EES18004 Sorghum cytosol 32.64 32.27
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.5.3Gene3D:3.30.200.20Gene3D:3.30.310.80EntrezGene:8076654UniProt:C4P7U0EnsemblPlants:EES17341
ProteinID:EES17341ProteinID:EES17341.1EMBL:FJ901219GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0006464GO:GO:0006468GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016310
GO:GO:0016740GO:GO:0019538GO:GO:0035556InterPro:IPR000719InterPro:IPR018451InterPro:Kinase-like_dom_sf
InterPro:NAF/FISL_domainInterPro:NAF_domPFAM:PF00069PFAM:PF03822PIRSF:PIRSF000654ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PFscan:PS50816PANTHER:PTHR24343PANTHER:PTHR24343:SF159InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSMART:SM00220EnsemblPlantsGene:SORBI_3008G158100SUPFAM:SSF56112unigene:Sbi.21626InterPro:Ser/Thr_kinase_AS
UniParc:UPI0001A4202CRefSeq:XP_002443503.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr8:-:59087181..59088488
Molecular Weight (calculated)
47569.6 Da
IEP (calculated)
8.779
GRAVY (calculated)
-0.164
Length
435 amino acids
Sequence
(BLAST)
001: MDAMDSKSKG SNKKGKSLLG KYELGRLLGR GTFAKVYLAR PVDGGGEAVA VKVLDKAEVM GTAGMAPRVL REVTAMRRLR HPNVLRLHEV LATRAKIYLV
101: MELATGGDLL SRLAALPRRR LPEHAARRVF VQLVAALSYC HARGVAHRDV KPQNVLLDGD GNLKVSDFGL SALPDSLRDD GRLHTACGTP AYAAPEVLRR
201: KAYDGAKADA WSCGVILFVL LAGHLPFDDS NIADMCRKAH RREFEFPEWV SQPARRLVSR LLDPNPATRV AVETLTTHPW FKRSLSVDSQ LGALLNGQQE
301: RALAFQAPAM NAFDIISMSS GLDLSGLFDQ RNREKRFMTT ASPERTLEEL GRAGGKLGYV VVGKKGVDCL PLGGLLGLSA MTVEMSEVAP PLMLVELRLE
401: VVDGDGDGEE QGFGWEELKH ELGDVVRAWH SCQDF
Best Arabidopsis Sequence Match ( AT4G14580.1 )
(BLAST)
001: MESPYPKSPE KITGTVLLGK YELGRRLGSG SFAKVHVARS ISTGELVAIK IIDKQKTIDS GMEPRIIREI EAMRRLHNHP NVLKIHEVMA TKSKIYLVVE
101: YAAGGELFTK LIRFGRLNES AARRYFQQLA SALSFCHRDG IAHRDVKPQN LLLDKQGNLK VSDFGLSALP EHRSNNGLLH TACGTPAYTA PEVIAQRGYD
201: GAKADAWSCG VFLFVLLAGY VPFDDANIVA MYRKIHKRDY RFPSWISKPA RSIIYKLLDP NPETRMSIEA VMGTVWFQKS LEISEFQSSV FELDRFLEKE
301: AKSSNAITAF DLISLSSGLD LSGLFERRKR KEKRFTARVS AERVVEKAGM IGEKLGFRVE KKEETKVVGL GKGRTAVVVE VVEFAEGLVV ADVKVVVEGE
401: EEEEEVESHW SELIVELEEI VLSWHN
Arabidopsis Description
CIPK4CBL-interacting serine/threonine-protein kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUL7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.