CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

plastid 3
cytosol 2
nucleus 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG98442
KRH41326
KRH46425
KRH60052

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23000.1	KRH41326	AT4G01420.1	11230129
AT3G23000.1	KRH60052	AT4G01420.1	11230129
AT3G23000.1	KRG98442	AT5G55990.1	11230129
AT3G23000.1	KRH46425	AT5G55990.1	11230129
AT3G23000.1	KRG98442	AT5G55990.1	14730130
AT3G23000.1	KRH46425	AT5G55990.1	14730130
AT4G14580.1	KRG98442	AT5G55990.1	11230129
AT4G14580.1	KRH46425	AT5G55990.1	11230129

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92436	Soybean	plastid	90.16	90.37
KRH31632	Soybean	plastid	67.28	68.21
Bra036870.1-P	Field mustard	cytosol	40.05	63.87
VIT_05s0020g04570.t01	Wine grape	mitochondrion, nucleus	57.44	59.76
Bra023777.1-P	Field mustard	cytosol	56.52	59.66
AT4G14580.1	Thale cress	cytosol	57.67	59.15
CDY35487	Canola	cytosol	55.84	58.94
CDY40835	Canola	cytosol	55.38	58.45
Bra033893.1-P	Field mustard	cytosol	56.06	58.06
CDY10690	Canola	cytosol	56.29	58.02
CDY10342	Canola	cytosol, nucleus, plastid	56.06	57.65
Solyc09g083090.2.1	Tomato	cytosol	50.8	57.22
AT3G23000.1	Thale cress	plastid	56.06	57.11
PGSC0003DMT400015582	Potato	cytosol, peroxisome	56.75	56.62
CDY29745	Canola	cytosol, nucleus, plastid	55.61	56.25
Solyc09g083100.1.1	Tomato	cytosol	55.15	55.53
PGSC0003DMT400034837	Potato	cytosol	51.95	52.42
CDY29744	Canola	plastid	53.55	51.88
Solyc03g005330.1.1	Tomato	cytosol	50.57	51.64
CDY16275	Canola	plastid	54.92	50.74
EES17341	Sorghum	cytosol	48.51	48.74
Zm00001d041422_P001	Maize	cytosol	45.08	48.17
HORVU5Hr1G093660.1	Barley	cytosol, mitochondrion, plastid	47.14	47.8
Bra036868.1-P	Field mustard	plastid	53.55	47.76
KXG37976	Sorghum	cytosol, mitochondrion, plastid	46.91	47.56
Zm00001d033316_P001	Maize	cytosol	46.68	47.55
CDY16278	Canola	plastid	52.63	47.52
TraesCS5D01G387900.1	Wheat	mitochondrion	46.68	47.33
TraesCS5B01G381500.1	Wheat	mitochondrion	46.68	47.33
TraesCS5A01G377900.1	Wheat	mitochondrion	46.68	47.33
GSMUA_Achr6P23040_001	Banana	mitochondrion	39.13	46.85
TraesCS5A01G057400.1	Wheat	cytosol	46.0	46.42
TraesCS5B01G059300.1	Wheat	mitochondrion	45.77	46.3
TraesCS5D01G068700.1	Wheat	cytosol	45.54	45.96
Os03t0634400-01	Rice	cytosol, mitochondrion	46.91	45.86
HORVU5Hr1G014200.1	Barley	cytosol	45.31	45.73
TraesCS3A01G446800.1	Wheat	mitochondrion	43.94	44.44
TraesCS3B01G482200.1	Wheat	mitochondrion	43.71	44.21
TraesCS3D01G439400.1	Wheat	mitochondrion	43.48	43.98
GSMUA_Achr2P17540_001	Banana	cytosol, plasma membrane, plastid	45.77	41.24
KRH08281	Soybean	cytosol	16.93	35.07
Os12t0603700-00	Rice	cytosol	29.98	29.84

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:100784173	MapMan:18.4.5.3	Gene3D:3.30.200.20	Gene3D:3.30.310.80	UniProt:A0A0R0HUY3	EMBL:ACUP02006591
EnsemblPlantsGene:GLYMA_10G179600	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR018451	EnsemblPlants:KRH34366	ProteinID:KRH34366	ProteinID:KRH34366.1
InterPro:Kinase-like_dom_sf	InterPro:NAF/FISL_domain	InterPro:NAF_dom	PFAM:PF00069	PFAM:PF03822	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816	PANTHER:PTHR24343	PANTHER:PTHR24343:SF102
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00018C6BB7
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:41288232..41290368

Molecular Weight (calculated)

48537.5 Da

IEP (calculated)

9.504

GRAVY (calculated)

-0.233

Length

437 amino acids

Sequence
(BLAST)

001: MEPPLQQKSP QPPPRTATIL GKYQLTRFLG RGSFAKVYQG RSLVDGSAVA VKIIDKSKTV DAGMEPRIIR EIDAMRRLHH HPNILKIHEV LATKTKIHLV
101: VELAAGGELF AKISRRGKLP ESTARRYFQQ LVSALRFCHR NGVAHRDLKP QNLLLDGDGN LKVSDFGLSA LPEQLKNGLL HTACGTPAYT APEILRRSGG
201: YDGSKADAWS CGLILFVFLA GHLPFDDTNI PAMCKKISRR DYQFPEWISK PARFVIHKLL DPNPETRISL ESLFGNAWFK KSLNPETAEE NALGLSYVKS
301: SYNYEGSKKS SGVTAFDIIS MSSGLDLTRL FETTSDLGSK REKRFSSSAR VEVVEEKVKE VGGVLGFKIE VGKSNGAIAL VKGKVALVFE VLEIVPHELL
401: FVAVKVVEGA LEFEEHHWGD WKDALQDLVL SWHNQES

Best Arabidopsis Sequence Match ( AT3G23000.1 )
(BLAST)

001: MESLPQPQNQ SSPATTPAKI LLGKYELGRR LGSGSFAKVH LARSIESDEL VAVKIIEKKK TIESGMEPRI IREIDAMRRL RHHPNILKIH EVMATKSKIY
101: LVMELASGGE LFSKVLRRGR LPESTARRYF QQLASALRFS HQDGVAHRDV KPQNLLLDEQ GNLKVSDFGL SALPEHLQNG LLHTACGTPA YTAPEVISRR
201: GYDGAKADAW SCGVILFVLL VGDVPFDDSN IAAMYRKIHR RDYRFPSWIS KQAKSIIYQM LDPNPVTRMS IETVMKTNWF KKSLETSEFH RNVFDSEVEM
301: KSSVNSITAF DLISLSSGLD LSGLFEAKKK KERRFTAKVS GVEVEEKAKM IGEKLGYVVK KKMMKKEGEV KVVGLGRGRT VIVVEAVELT VDVVVVEVKV
401: VEGEEDDSRW SDLITELEDI VLSWHNDIM

Arabidopsis Description

CIPK7CBL-interacting serine/threonine-protein kinase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIW0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.