CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG92436
KRG98160
KRG98172
KRH02470
KRH12685
KRH12829
KRH17163
KRH18584
KRH19498
KRH30131
KRH31632
KRH34366
KRH37641
KRH37794
KRH41326
KRH60052
KRH72808
KRH72812

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01420.1	KRH12829	AT1G30270.1	16814720
AT4G01420.1	KRH37794	AT1G30270.1	16814720
AT4G01420.1	KRG98160	AT2G30360.1	11230129
AT4G01420.1	KRH17163	AT2G30360.1	11230129
AT4G01420.1	KRH18584	AT2G30360.1	11230129
AT4G01420.1	KRH72812	AT2G30360.1	11230129
AT4G01420.1	KRH02470	AT3G17510.1	11230129
AT4G01420.1	KRH12685	AT3G17510.1	11230129
AT4G01420.1	KRH19498	AT3G17510.1	11230129
AT4G01420.1	KRH37641	AT3G17510.1	11230129
AT4G01420.1	KRG92436	AT3G23000.1	11230129
AT4G01420.1	KRH31632	AT3G23000.1	11230129
AT4G01420.1	KRH34366	AT3G23000.1	11230129
AT4G01420.1	KRH41326	AT4G01420.1	11402167
AT4G01420.1	KRH60052	AT4G01420.1	11402167
AT4G01420.1	KRG98172	AT5G07070.1	11230129
AT4G01420.1	KRH30131	AT5G07070.1	11230129
AT4G01420.1	KRH72808	AT5G07070.1	11230129

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60052	Soybean	cytosol	87.23	89.13
PGSC0003DMT400014960	Potato	cytosol	31.91	63.03
Bra002301.1-P	Field mustard	cytosol	26.38	56.36
KRH53498	Soybean	cytosol	51.06	53.81
KRH01928	Soybean	cytosol	51.06	53.1
KRH64445	Soybean	cytosol	50.21	52.91
KRG98442	Soybean	cytosol	50.64	52.65
KRH46425	Soybean	endoplasmic reticulum	50.64	52.65
KRH51220	Soybean	endoplasmic reticulum	50.64	52.65
AT4G01420.1	Thale cress	cytosol	45.11	52.22
KRH28207	Soybean	cytosol	46.38	51.42
CDX92464	Canola	cytosol	44.68	51.22
CDY56859	Canola	cytosol	44.68	51.22
KRH57533	Soybean	mitochondrion	45.96	50.7
PGSC0003DMT400014962	Potato	cytosol	20.85	50.0
VIT_02s0025g01630.t01	Wine grape	cytosol	54.47	48.67
KRH36643	Soybean	cytosol	46.38	48.23
KRH04244	Soybean	cytosol	44.68	47.95
KRH05482	Soybean	cytosol, plasma membrane, plastid	45.53	41.47
KRH44162	Soybean	cytosol, extracellular	46.38	41.13
KRH47134	Soybean	cytosol	45.53	40.68

Protein Annotations

EMBL:ACUP02004759	EnsemblPlants:KRH41326	EnsemblPlantsGene:GLYMA_08G023700	EntrezGene:100783417	Gene3D:1.10.238.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR23056
PANTHER:PTHR23056:SF85	PFAM:PF13202	PFscan:PS50222	PRINTS:PR00450	ProteinID:KRH41326	ProteinID:KRH41326.1
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000233859A	UniProt:I1KPK9	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr8:-:1884152..1886999

Molecular Weight (calculated)

26726.6 Da

IEP (calculated)

4.529

GRAVY (calculated)

-0.276

Length

235 amino acids

Sequence
(BLAST)

001: MGCCCTKQRV DQKDPAVLAS QTYFNLSEIE ALYDLFKKLS SSIIDDGVIS KEEFQLGLFG SSEKRSLFAD RVFELFDSKN NGVIEFGEFV QALSVFHPAA
101: PQTQKADFAF RLYDICQRGF IQRHEVREMI LALLNESNLV LSHEIIEVII DKTFEEADSK GDGRIDPEEW QEFVARNPSL LLRNMTIPYL KDLTTQFHSF
201: KLTSGIEDCT SRSSTSPEKD NILELKDNFN GVSIN

Best Arabidopsis Sequence Match ( AT4G26570.1 )
(BLAST)

001: MSQCIDGFKH VCSSFFRCFD IDIYKQSGGL GDPELLARET VFSVSEIEAL YELFKKISSA VIDDGLINKE EFQLALFKTN KKESLFADRV FDLFDTKHNG
101: ILGFEEFARA LSVFHPNAPI EDKIDFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLS DEIIESIIDK TFEEADTKHD GRIDKEEWRT LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVEDT

Arabidopsis Description

ATCBL3calcineurin B-like 3 [Source:TAIR;Acc:AT4G26570]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.