Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plasma membrane 3
- extracellular 2
- golgi 2
- endoplasmic reticulum 2
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G26560.1 | KRH03685 | AT5G35410.1 | 11402167 |
| AT4G26560.1 | KRH20252 | AT5G35410.1 | 11402167 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s1569g00020.t01 | Wine grape | cytosol | 72.12 | 88.59 |
| KRH51220 | Soybean | endoplasmic reticulum | 86.73 | 86.73 |
| KRH01928 | Soybean | cytosol | 85.84 | 85.84 |
| KRG98442 | Soybean | cytosol | 83.19 | 83.19 |
| KRH46425 | Soybean | endoplasmic reticulum | 83.19 | 83.19 |
| GSMUA_AchrUn_... | Banana | cytosol | 73.45 | 73.45 |
| AT4G26560.1 | Thale cress | nucleus | 55.75 | 58.88 |
| KRH57533 | Soybean | mitochondrion | 53.54 | 56.81 |
| KRH28207 | Soybean | cytosol | 52.21 | 55.66 |
| KRH04244 | Soybean | cytosol | 49.56 | 51.14 |
| KRH53498 | Soybean | cytosol | 48.23 | 48.88 |
| KRH64445 | Soybean | cytosol | 48.23 | 48.88 |
| KRH60052 | Soybean | cytosol | 48.23 | 47.39 |
| KRH41326 | Soybean | cytosol | 48.23 | 46.38 |
| KRH47134 | Soybean | cytosol | 50.44 | 43.35 |
| KRH44162 | Soybean | cytosol, extracellular | 49.12 | 41.89 |
| KRH05482 | Soybean | cytosol, plasma membrane, plastid | 46.02 | 40.31 |
Protein Annotations
| Gene3D:1.10.238.10 | EntrezGene:100808191 | MapMan:35.1 | EMBL:ACUP02005386 | InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom |
| EnsemblPlantsGene:GLYMA_09G0160001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | InterPro:IPR002048 | UniProt:K7LBA3 |
| EnsemblPlants:KRH36643 | ProteinID:KRH36643 | ProteinID:KRH36643.1 | ProteinID:KRH36644.1 | ProteinID:KRH36645.1 | ProteinID:KRH36646.1 |
| ProteinID:KRH36647.1 | PFAM:PF13499 | PFAM:PF13833 | PRINTS:PR00450 | PFscan:PS50222 | PANTHER:PTHR23056 |
| PANTHER:PTHR23056:SF51 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI000233D1F0 | : | : |
Description
hypothetical protein
Coordinates
chr9:+:1235403..1239576
Molecular Weight (calculated)
25922.1 Da
IEP (calculated)
4.642
GRAVY (calculated)
-0.124
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MVHCLDGLKQ LYIAVINFCD ADLCPEPRGL QHPEVLARET VFSVSEIEAL YELFKKISSG VMDKGLITKD EFQLALFKTT KKESLFTDRV FDLFDTKHSG
101: ILDFKEFALA LSVFHPSASI DDKIEFSFQL YDLKQQGFIQ RQELKQMVVA TLAESGMNLA DDVIESIIDK TFEEVDTKHD GKIDKEEWRN LVLQHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVDDV
101: ILDFKEFALA LSVFHPSASI DDKIEFSFQL YDLKQQGFIQ RQELKQMVVA TLAESGMNLA DDVIESIIDK TFEEVDTKHD GKIDKEEWRN LVLQHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVDDV
001: MMMQCLDGLK HLALILLTCC DADPPKVRQN PKDVARGTVF TVNEIEALYE LFKSISKNGL IDKEQFQLVL FKMNTTRSLF ADRVFDLFDT KNTGILDFEA
101: FARSLSVFHP NAKFEDKIEF SFKLYDLNQQ GYIKRQEVKQ MVVRTLAESG MNLSDHVIES IIDKTFEEAD TKLDGKIDKE EWRSLVLRHP SLLQNMSLQH
201: LKDVTKTFPN FVFHTIVTDT PSELDG
101: FARSLSVFHP NAKFEDKIEF SFKLYDLNQQ GYIKRQEVKQ MVVRTLAESG MNLSDHVIES IIDKTFEEAD TKLDGKIDKE EWRSLVLRHP SLLQNMSLQH
201: LKDVTKTFPN FVFHTIVTDT PSELDG
Arabidopsis Description
CBL6Calcineurin B-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P6]
SUBAcon: [extracellular,cytosol]
SUBAcon: [extracellular,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.