CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

plastid 1
extracellular 3
plasma membrane 3
endoplasmic reticulum 2
vacuole 2
golgi 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91957
KRG98019
KRH03685
KRH20053
KRH20252
KRH34819

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33000.1	KRG91957	AT3G54840.1	17825054
AT4G33000.1	KRH34819	AT3G54840.1	17825054
AT4G33000.1	KRG98019	AT4G19640.1	17825054
AT4G33000.1	KRH20053	AT4G19640.1	17825054
AT4G33000.1	KRH03685	AT5G35410.1	17449811
AT4G33000.1	KRH20252	AT5G35410.1	17449811
AT4G33000.1	KRH03685	AT5G35410.1	17825054
AT4G33000.1	KRH20252	AT5G35410.1	17825054
AT4G33000.1	KRH03685	AT5G35410.1	19448033
AT4G33000.1	KRH20252	AT5G35410.1	19448033

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47134	Soybean	cytosol	90.94	91.64
Bra011404.1-P	Field mustard	cytosol, plastid	55.47	69.67
CDX68929	Canola	cytosol, endoplasmic reticulum, mitochondrion	63.4	67.47
CDX75314	Canola	cytosol, endoplasmic reticulum	63.4	67.47
CDY04300	Canola	cytosol	32.45	65.65
Bra034543.1-P	Field mustard	cytosol	60.0	64.63
CDY45024	Canola	cytosol	60.0	64.63
CDY28278	Canola	cytosol	59.62	64.23
Bra037030.1-P	Field mustard	cytosol	61.51	63.18
CDY13513	Canola	endoplasmic reticulum, nucleus, plasma membrane	51.7	63.13
Solyc08g065330.2.1	Tomato	endoplasmic reticulum, extracellular	60.75	62.65
AT4G33000.1	Thale cress	golgi, plastid	59.62	61.72
CDX72384	Canola	cytosol	61.89	61.42
GSMUA_Achr3P32370_001	Banana	cytosol	57.74	57.95
Os01t0711500-00	Rice	plastid	57.74	57.52
TraesCS3D01G211300.1	Wheat	cytosol	60.75	55.9
KRH05482	Soybean	cytosol, plasma membrane, plastid	54.34	55.81
TraesCS3B01G235500.1	Wheat	cytosol	60.0	55.21
KRH46425	Soybean	endoplasmic reticulum	46.79	54.87
KRG98442	Soybean	cytosol	46.79	54.87
KRH01928	Soybean	cytosol	46.79	54.87
TraesCS3A01G053300.1	Wheat	golgi	60.0	54.45
KRH51220	Soybean	endoplasmic reticulum	46.42	54.42
TraesCS3B01G064500.2	Wheat	cytosol, golgi, mitochondrion	60.0	53.72
KXG33232	Sorghum	endoplasmic reticulum	56.98	53.36
KRH57533	Soybean	mitochondrion	41.51	51.64
KRH53498	Soybean	cytosol	43.02	51.12
KXG32770	Sorghum	cytosol, plastid	61.51	51.1
PGSC0003DMT400076980	Potato	mitochondrion	55.85	51.03
KRH64445	Soybean	cytosol	42.64	50.67
KRH28207	Soybean	cytosol	40.38	50.47
KRH36643	Soybean	cytosol	41.89	49.12
KRH04244	Soybean	cytosol	39.25	47.49
KRH60052	Soybean	cytosol	40.38	46.52
KRH41326	Soybean	cytosol	41.13	46.38
TraesCS3A01G208300.2	Wheat	cytosol, mitochondrion	61.51	44.9
Zm00001d044285_P003	Maize	plastid	60.38	44.32
Os01t0579600-01	Rice	cytosol	35.85	43.58

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:100306023	MapMan:26.6.1.1.3	EMBL:ACUP02004908	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_08G194000	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	UniProt:I1KUV0	InterPro:IPR002048	EnsemblPlants:KRH44162	ProteinID:KRH44162
ProteinID:KRH44162.1	PFAM:PF13202	PFAM:PF13833	PRINTS:PR00450	ScanProsite:PS00018	PFscan:PS50222
PANTHER:PTHR23056	PANTHER:PTHR23056:SF26	SMART:SM00054	SUPFAM:SSF47473	TMHMM:TMhelix	UniParc:UPI00023C6B6F
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:15627826..15630751

Molecular Weight (calculated)

30780.7 Da

IEP (calculated)

4.763

GRAVY (calculated)

-0.223

Length

265 amino acids

Sequence
(BLAST)

001: MEFQDKRLSL RSSLTFSETL CAVFIPFIGI VEALVFTFTS CFDFQSPRNK KKHSSTFDDI LTLAEDSPFS INEIEALREL FKKLSSSIID DGLIHKEELT
101: LALLKTTTGE NLFLDRVFDV FDEKRNGVIE FEEFVHALSI FHPCTPLEKK IDFAFRLYDL RQTGYIEREE VRQMVVAILS ECGMDLDDEI LDTIIDKKKN
201: QTFQDADADK DDKISKEEWK AFVIRHPTLL KHMTLPHLKD ITTLFTSFIF NTEVDDSHWH INGNH

Best Arabidopsis Sequence Match ( AT4G33000.2 )
(BLAST)

001: MEQVSSRSSS LTVGEQFCAV FIPFFAIIDV LVSSVGQCFD CRSTSPRTCQ HADLERLARE SQFSVNEVEA LYELFKKLSC SIIDDGLIHK EELRLALFQA
101: PYGENLFLDR VFDLFDEKKN GVIEFEEFIH ALSVFHPYAS IQEKTDFAFR LYDLRQTGFI EREEVQQMVS AILLESDMML SDELLTMIID KTFADADSDK
201: DGKISKDEWN VYVHKHPSLL KNMTLPYLKD VTTAFPSFIF NTEVED

Arabidopsis Description

CBL10Calcineurin B-like 10 [Source:UniProtKB/TrEMBL;Acc:M5BEI3]
SUBAcon: [endoplasmic reticulum,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.