Factsheet for TraesCS3A01G053300.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 1
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, golgi, plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G140700.1
TraesCS1B01G157100.1
TraesCS1D01G139500.1
TraesCS4A01G035800.1
TraesCS4A01G294600.1
TraesCS4B01G019100.2
TraesCS4B01G268600.1
TraesCS4D01G017300.1
TraesCS4D01G267900.1
TraesCS5B01G014400.1
TraesCS5D01G022200.2
TraesCS7A01G377600.1
TraesCS7B01G279300.1
TraesCS7D01G374400.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33000.1	TraesCS1A01G140700.1	AT3G54840.1	17825054
AT4G33000.1	TraesCS1B01G157100.1	AT3G54840.1	17825054
AT4G33000.1	TraesCS1D01G139500.1	AT3G54840.1	17825054
AT4G33000.1	TraesCS4A01G035800.1	AT3G54840.1	17825054
AT4G33000.1	TraesCS4B01G268600.1	AT3G54840.1	17825054
AT4G33000.1	TraesCS4D01G267900.1	AT3G54840.1	17825054
AT4G33000.1	TraesCS4A01G294600.1	AT4G19640.1	17825054
AT4G33000.1	TraesCS4B01G019100.2	AT4G19640.1	17825054
AT4G33000.1	TraesCS4D01G017300.1	AT4G19640.1	17825054
AT4G33000.1	TraesCS5B01G014400.1	AT4G19640.1	17825054
AT4G33000.1	TraesCS5D01G022200.2	AT4G19640.1	17825054
AT4G33000.1	TraesCS7A01G377600.1	AT5G35410.1	17449811
AT4G33000.1	TraesCS7B01G279300.1	AT5G35410.1	17449811
AT4G33000.1	TraesCS7D01G374400.2	AT5G35410.1	17449811
AT4G33000.1	TraesCS7A01G377600.1	AT5G35410.1	17825054
AT4G33000.1	TraesCS7B01G279300.1	AT5G35410.1	17825054
AT4G33000.1	TraesCS7D01G374400.2	AT5G35410.1	17825054
AT4G33000.1	TraesCS7A01G377600.1	AT5G35410.1	19448033
AT4G33000.1	TraesCS7B01G279300.1	AT5G35410.1	19448033
AT4G33000.1	TraesCS7D01G374400.2	AT5G35410.1	19448033

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G064500.2	Wheat	cytosol, golgi, mitochondrion	92.81	91.55
Bra011404.1-P	Field mustard	cytosol, plastid	53.77	74.41
KXG32770	Sorghum	cytosol, plastid	78.42	71.79
CDY04300	Canola	cytosol	32.19	71.76
CDX75314	Canola	cytosol, endoplasmic reticulum	59.93	70.28
CDX68929	Canola	cytosol, endoplasmic reticulum, mitochondrion	59.59	69.88
Os01t0579600-01	Rice	cytosol	51.37	68.81
Bra034543.1-P	Field mustard	cytosol	57.88	68.7
CDY45024	Canola	cytosol	57.88	68.7
CDY28278	Canola	cytosol	57.53	68.29
TraesCS3A01G208300.2	Wheat	cytosol, mitochondrion	84.59	68.04
VIT_04s0008g00950.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plastid	59.93	67.83
Solyc08g065330.2.1	Tomato	endoplasmic reticulum, extracellular	59.25	67.32
CDY13513	Canola	endoplasmic reticulum, nucleus, plasma membrane	48.63	65.44
AT4G33000.1	Thale cress	golgi, plastid	57.19	65.23
Bra037030.1-P	Field mustard	cytosol	57.53	65.12
CDX72384	Canola	cytosol	59.25	64.79
GSMUA_Achr3P32370_001	Banana	cytosol	58.56	64.77
VIT_04s0008g00960.t01	Wine grape	plastid	55.14	64.14
TraesCS5A01G124700.1	Wheat	cytosol	47.26	61.06
Zm00001d044285_P003	Maize	plastid	74.32	60.11
KRH44162	Soybean	cytosol, extracellular	54.45	60.0
TraesCS5A01G060600.1	Wheat	cytosol	45.89	59.56
KRH47134	Soybean	cytosol	53.42	59.32
TraesCS1A01G215800.1	Wheat	cytosol	43.15	58.6
TraesCS4A01G245500.1	Wheat	cytosol	44.52	57.78
KRH05482	Soybean	cytosol, plasma membrane, plastid	50.68	57.36
TraesCS5A01G545500.2	Wheat	cytosol	42.12	57.21
TraesCS1A01G261200.1	Wheat	cytosol	43.15	56.25
PGSC0003DMT400076980	Potato	mitochondrion	55.14	55.52
TraesCS1A01G352200.1	Wheat	cytosol	42.12	55.41

Protein Annotations

EnsemblPlants:TraesCS3A01G053300.1	EnsemblPlantsGene:TraesCS3A01G053300	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR23056	PANTHER:PTHR23056:SF26
PFAM:PF13202	PFAM:PF13499	PFscan:PS50222	PRINTS:PR00450	ScanProsite:PS00018	SEG:seg
SMART:SM00054	SUPFAM:SSF47473	TIGR:cd00051	MapMan:26.6.1.1.3	:	:

Description

No Description!

Coordinates

chr3A:+:30344700..30346955

Molecular Weight (calculated)

32951.4 Da

IEP (calculated)

4.758

GRAVY (calculated)

-0.031

Length

292 amino acids

Sequence
(BLAST)

001: MASRFSFGIS SGDLRSGSSL TVGERLCAVV LPCVAIAEFV FFALTDCLGG ICPPSSNSST HLRRDPSAPS FFLTAKKGSH HRRRGRVGPG CTSLVFRDLA
101: RLADESRCFS VNEVEALFEL YKKISCSIID DGLIHKEELQ LALFKTPSGQ NLFLDRVFDL FDEKKNGVIE FEEFIHALSV FHPLAPVEDK INFAFRLYDL
201: RQTGFIEREE VMQMVIAILM ESDVELSDEL LEAILDKTFE DADTDRDGKI CQEEWKEFVL RHPNLLKNMT LPYLRDVTTA FPSFVFNTAV ED

Best Arabidopsis Sequence Match ( AT4G33000.2 )
(BLAST)

001: MEQVSSRSSS LTVGEQFCAV FIPFFAIIDV LVSSVGQCFD CRSTSPRTCQ HADLERLARE SQFSVNEVEA LYELFKKLSC SIIDDGLIHK EELRLALFQA
101: PYGENLFLDR VFDLFDEKKN GVIEFEEFIH ALSVFHPYAS IQEKTDFAFR LYDLRQTGFI EREEVQQMVS AILLESDMML SDELLTMIID KTFADADSDK
201: DGKISKDEWN VYVHKHPSLL KNMTLPYLKD VTTAFPSFIF NTEVED

Arabidopsis Description

CBL10Calcineurin B-like 10 [Source:UniProtKB/TrEMBL;Acc:M5BEI3]
SUBAcon: [endoplasmic reticulum,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.