Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- endoplasmic reticulum 2
- plasma membrane 2
- extracellular 1
- vacuole 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_04s0079g00760.t01 | |
| VIT_11s0016g05420.t01 | |
| VIT_13s0019g04680.t01 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_04s0008g00950.t01 | Wine grape | cytosol, endoplasmic reticulum, mitochondrion, plastid | 78.49 | 76.36 |
| CDY04300 | Canola | cytosol | 37.05 | 70.99 |
| Bra011404.1-P | Field mustard | cytosol, plastid | 59.36 | 70.62 |
| VIT_00s1569g00020.t01 | Wine grape | cytosol | 49.4 | 67.39 |
| CDX75314 | Canola | cytosol, endoplasmic reticulum | 65.34 | 65.86 |
| CDX68929 | Canola | cytosol, endoplasmic reticulum, mitochondrion | 64.94 | 65.46 |
| CDY28278 | Canola | cytosol | 63.74 | 65.04 |
| CDY45024 | Canola | cytosol | 63.74 | 65.04 |
| Bra034543.1-P | Field mustard | cytosol | 63.35 | 64.63 |
| CDY13513 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 54.18 | 62.67 |
| AT4G33000.1 | Thale cress | golgi, plastid | 63.74 | 62.5 |
| Solyc08g065330.2.1 | Tomato | endoplasmic reticulum, extracellular | 63.35 | 61.87 |
| VIT_16s0098g01870.t01 | Wine grape | cytosol | 51.79 | 61.03 |
| Bra037030.1-P | Field mustard | cytosol | 62.15 | 60.47 |
| CDX72384 | Canola | cytosol | 64.14 | 60.3 |
| VIT_19s0015g01070.t01 | Wine grape | extracellular | 52.99 | 58.85 |
| VIT_02s0025g01640.t01 | Wine grape | cytosol | 50.2 | 57.53 |
| Os01t0711500-00 | Rice | plastid | 60.96 | 57.52 |
| GSMUA_Achr3P32370_001 | Banana | cytosol | 59.36 | 56.44 |
| VIT_02s0236g00140.t01 | Wine grape | cytosol | 47.01 | 55.4 |
| TraesCS3D01G211300.1 | Wheat | cytosol | 63.35 | 55.21 |
| TraesCS3A01G053300.1 | Wheat | golgi | 64.14 | 55.14 |
| TraesCS3B01G235500.1 | Wheat | cytosol | 62.55 | 54.51 |
| KXG33232 | Sorghum | endoplasmic reticulum | 60.96 | 54.06 |
| TraesCS3B01G064500.2 | Wheat | cytosol, golgi, mitochondrion | 63.74 | 54.05 |
| VIT_02s0236g00150.t01 | Wine grape | cytosol | 47.41 | 53.36 |
| KXG32770 | Sorghum | cytosol, plastid | 67.73 | 53.29 |
| PGSC0003DMT400076980 | Potato | mitochondrion | 60.96 | 52.76 |
| Zm00001d044285_P003 | Maize | plastid | 67.33 | 46.81 |
| TraesCS3A01G208300.2 | Wheat | cytosol, mitochondrion | 64.14 | 44.35 |
| VIT_02s0025g01630.t01 | Wine grape | cytosol | 45.42 | 43.35 |
| Os01t0579600-01 | Rice | cytosol | 36.65 | 42.2 |
| VIT_00s0194g00040.t01 | Wine grape | cytosol | 11.95 | 7.41 |
Protein Annotations
| Gene3D:1.10.238.10 | EntrezGene:100254259 | wikigene:100254259 | MapMan:26.6.1.1.3 | ProteinID:ACQ83561 | ProteinID:ACQ83561.1 |
| ProteinID:CBI20636 | ProteinID:CBI20636.3 | EntrezGene:CBL07 | wikigene:CBL07 | UniProt:D7STN7 | InterPro:EF-hand-dom_pair |
| InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | EMBL:FJ901273 | EMBL:FN595231 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR002048 | PFAM:PF13499 |
| ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR23056 | PANTHER:PTHR23056:SF26 | SMART:SM00054 | SUPFAM:SSF47473 |
| TIGR:TC68986 | TMHMM:TMhelix | UniParc:UPI0001982E2B | ArrayExpress:VIT_04s0008g00960 | EnsemblPlantsGene:VIT_04s0008g00960 | EnsemblPlants:VIT_04s0008g00960.t01 |
| unigene:Vvi.17005 | RefSeq:XP_010648273.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4:+:841100..846916
Molecular Weight (calculated)
28989.6 Da
IEP (calculated)
4.629
GRAVY (calculated)
-0.122
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSTESSWRS SPVTMGGRFC ASFIPFFSII EGLVFAVANF CSIHRTHHHR NLRYGLRELT QLAGETQFTV NEVEALYELF KKLSSSIIDD GLIHKEELQL
101: ALLKSPCGQN LFLDRVFYLF DERKNGAIEF DEFVRALSVF HPYAPMEDKI DFAFRLYDLR QTGFIEREDV KQMVIVTLME SEMDLSDDLL EAIIDKTFVD
201: ADADRDGKIS KEEWRAFVLR HPNLLNNMSL SYLKDVTTVF PSFVINSEVE D
101: ALLKSPCGQN LFLDRVFYLF DERKNGAIEF DEFVRALSVF HPYAPMEDKI DFAFRLYDLR QTGFIEREDV KQMVIVTLME SEMDLSDDLL EAIIDKTFVD
201: ADADRDGKIS KEEWRAFVLR HPNLLNNMSL SYLKDVTTVF PSFVINSEVE D
001: MEQVSSRSSS LTVGEQFCAV FIPFFAIIDV LVSSVGQCFD CRSTSPRTCQ HADLERLARE SQFSVNEVEA LYELFKKLSC SIIDDGLIHK EELRLALFQA
101: PYGENLFLDR VFDLFDEKKN GVIEFEEFIH ALSVFHPYAS IQEKTDFAFR LYDLRQTGFI EREEVQQMVS AILLESDMML SDELLTMIID KTFADADSDK
201: DGKISKDEWN VYVHKHPSLL KNMTLPYLKD VTTAFPSFIF NTEVED
101: PYGENLFLDR VFDLFDEKKN GVIEFEEFIH ALSVFHPYAS IQEKTDFAFR LYDLRQTGFI EREEVQQMVS AILLESDMML SDELLTMIID KTFADADSDK
201: DGKISKDEWN VYVHKHPSLL KNMTLPYLKD VTTAFPSFIF NTEVED
Arabidopsis Description
CBL10Calcineurin B-like 10 [Source:UniProtKB/TrEMBL;Acc:M5BEI3]
SUBAcon: [endoplasmic reticulum,plastid]
SUBAcon: [endoplasmic reticulum,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.