Factsheet for VIT_11s0016g05420.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_00s0194g00040.t01
VIT_00s1569g00020.t01
VIT_01s0010g00340.t01
VIT_01s0011g04140.t01
VIT_02s0025g00960.t01
VIT_02s0025g01000.t01
VIT_02s0236g00140.t01
VIT_02s0236g00150.t01
VIT_04s0008g00950.t01
VIT_04s0008g00960.t01
VIT_05s0020g04420.t01
VIT_06s0009g01910.t01
VIT_08s0040g00470.t01
VIT_09s0054g00890.t01
VIT_11s0016g05420.t01
VIT_14s0068g01280.t01
VIT_17s0000g10280.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G35410.1	VIT_14s0068g01280.t01	AT1G12840.1	17875927
AT5G35410.1	VIT_01s0010g00340.t01	AT1G30860.1	21798944
AT5G35410.1	VIT_09s0054g00890.t01	AT1G78900.1	17875927
AT5G35410.1	VIT_01s0011g04140.t01	AT2G01190.1	21798944
AT5G35410.1	VIT_06s0009g01910.t01	AT2G41090.1	17360592
AT5G35410.1	VIT_08s0040g00470.t01	AT2G41090.1	17360592
AT5G35410.1	VIT_06s0009g01910.t01	AT2G41100.1	17360592
AT5G35410.1	VIT_08s0040g00470.t01	AT2G41100.1	17360592
AT5G35410.1	VIT_02s0025g00960.t01	AT4G11150.1	17875927
AT5G35410.1	VIT_02s0025g01000.t01	AT4G11150.1	17875927
AT5G35410.1	VIT_05s0020g04420.t01	AT4G14640.1	17360592
AT5G35410.1	VIT_00s1569g00020.t01	AT4G26560.1	11402167
AT5G35410.1	VIT_04s0008g00950.t01	AT4G33000.1	17449811
AT5G35410.1	VIT_04s0008g00960.t01	AT4G33000.1	17449811
AT5G35410.1	VIT_04s0008g00950.t01	AT4G33000.1	17825054
AT5G35410.1	VIT_04s0008g00960.t01	AT4G33000.1	17825054
AT5G35410.1	VIT_04s0008g00950.t01	AT4G33000.1	19448033
AT5G35410.1	VIT_04s0008g00960.t01	AT4G33000.1	19448033
AT5G35410.1	VIT_06s0009g01910.t01	AT5G21274.1	17360592
AT5G35410.1	VIT_08s0040g00470.t01	AT5G21274.1	17360592
AT5G35410.1	VIT_11s0016g05420.t01	AT5G35410.1	11402167
AT5G35410.1	VIT_02s0236g00140.t01	AT5G47100.1	14730064
AT5G35410.1	VIT_02s0236g00150.t01	AT5G47100.1	14730064
AT5G35410.1	VIT_00s0194g00040.t01	AT5G55990.1	11402167
AT5G35410.1	VIT_17s0000g10280.t01	AT5G63310.1	17785451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400007475	Potato	cytosol	80.27	80.27
KRH03685	Soybean	cytosol	80.04	80.04
Solyc12g009570.1.1	Tomato	cytosol	79.82	79.82
KRH20252	Soybean	cytosol	78.92	78.92
AT5G35410.1	Thale cress	cytosol	76.01	76.01
CDY44603	Canola	cytosol	73.77	72.63
Bra025613.1-P	Field mustard	cytosol	73.54	72.41
CDY36813	Canola	cytosol	73.32	72.19
Os06t0606000-01	Rice	cytosol	73.32	72.19
EER90021	Sorghum	cytosol	72.65	72.16
TraesCS7A01G377600.1	Wheat	mitochondrion	71.75	71.75
TraesCS7B01G279300.1	Wheat	mitochondrion	71.75	71.75
TraesCS7D01G374400.2	Wheat	mitochondrion	71.52	71.52
Zm00001d036879_P001	Maize	cytosol, mitochondrion	71.97	71.49
GSMUA_Achr10P...	Banana	cytosol	76.01	71.22
VIT_18s0001g07980.t01	Wine grape	cytosol	71.3	71.14
Zm00001d000407_P001	Maize	plastid	70.4	69.47
HORVU7Hr1G090260.14	Barley	cytosol	73.32	64.75
VIT_06s0009g01840.t01	Wine grape	cytosol	59.64	60.59
VIT_15s0048g02740.t01	Wine grape	cytosol	54.04	57.52
VIT_10s0003g04020.t01	Wine grape	cytosol	56.73	55.6
VIT_05s0020g00830.t01	Wine grape	cytosol	41.03	46.8
VIT_11s0052g01700.t01	Wine grape	cytosol	45.52	43.47
VIT_14s0108g01230.t01	Wine grape	cytosol	31.61	27.43
VIT_08s0040g00720.t01	Wine grape	cytosol	30.49	24.86

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:100262837	wikigene:100262837	MapMan:18.4.5.3	MapMan:26.6.1.1.2	Gene3D:3.30.200.20	Gene3D:3.30.310.80
ProteinID:ACQ83525	ProteinID:ACQ83525.1	EMBL:AM477122	ProteinID:CAN83760	ProteinID:CAN83760.1	ProteinID:CBI28210
ProteinID:CBI28210.3	EntrezGene:CIPK09	wikigene:CIPK09	UniProt:D7TC25	EMBL:FJ901237	EMBL:FN595756
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556
InterPro:IPR000719	InterPro:IPR018451	InterPro:Kinase-like_dom_sf	InterPro:NAF/FISL_domain	InterPro:NAF_dom	PFAM:PF00069
PFAM:PF03822	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816
PANTHER:PTHR24343	PANTHER:PTHR24343:SF157	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	TIGR:TC52694	TIGR:TC65960	UniParc:UPI00015C8E3D	ArrayExpress:VIT_11s0016g05420	EnsemblPlantsGene:VIT_11s0016g05420
EnsemblPlants:VIT_11s0016g05420.t01	unigene:Vvi.1080	RefSeq:XP_010656044.1	RefSeq:XP_010656045.1	RefSeq:XP_010656046.1	:

Description

Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:D7TC25]

Coordinates

chr11:-:4753250..4787655

Molecular Weight (calculated)

50525.9 Da

IEP (calculated)

8.520

GRAVY (calculated)

-0.255

Length

446 amino acids

Sequence
(BLAST)

001: MKKVTRKVGK YEVGRTIGEG TFAKVKFAHN TETGESVAMK VMAKSTILKH RMVDQIKQEI SIMKIVRHPN IVRLHEVLAS QTTIYIILEF VTGGELYDKI
101: VHQGRLSENE SRRYFQQLID AVSHCHSKGV YHRDLKPENL LLDSNGNLKV SDFGLSALPK QGVGLLHTTC GTPNYVAPEV LSNQGYDGAA ADVWSCGVIL
201: YVLMAGYLPF NEIDLPSLYK KINAAEFSCP FWFSSGSKSL LCRILDSNPK TRIRIEGIKN DPWFRKNYVS SKCREDEEVN LDDIHAVFDD IEENYVSEQS
301: GNNDTGPLIM NAFEMITLSQ GLNLSALFDR RQDYVKRQTR FVSREPAKVI ISTIEAVAES MNFKVHTRHY KTRLEGISAN KTAQFAVVLE VFEVAPSLFM
401: VDVRKAAGDT LEYHKFYKNF CAKLEHIIWK PKEAMTNSSL LRTMTC

Best Arabidopsis Sequence Match ( AT5G35410.1 )
(BLAST)

001: MTKKMRRVGK YEVGRTIGEG TFAKVKFARN TDTGDNVAIK IMAKSTILKN RMVDQIKREI SIMKIVRHPN IVRLYEVLAS PSKIYIVLEF VTGGELFDRI
101: VHKGRLEESE SRKYFQQLVD AVAHCHCKGV YHRDLKPENL LLDTNGNLKV SDFGLSALPQ EGVELLRTTC GTPNYVAPEV LSGQGYDGSA ADIWSCGVIL
201: FVILAGYLPF SETDLPGLYR KINAAEFSCP PWFSAEVKFL IHRILDPNPK TRIQIQGIKK DPWFRLNYVP IRAREEEEVN LDDIRAVFDG IEGSYVAENV
301: ERNDEGPLMM NAFEMITLSQ GLNLSALFDR RQDFVKRQTR FVSRREPSEI IANIEAVANS MGFKSHTRNF KTRLEGLSSI KAGQLAVVIE IYEVAPSLFM
401: VDVRKAAGET LEYHKFYKKL CSKLENIIWR ATEGIPKSEI LRTITF

Arabidopsis Description

CIPK24Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UB05]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.